Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01941 ATGGAGTTTTCACCGCTTGAGGGCTTTTTCGACTTCGATTCGGTCCCATTCCCATACCAAAGGGACCAACTTTGCTTCAGCGAGTTCCCTATGCTTGAAGATTTCGGCAGCAACTTTGCCTCTGCAGAATACAATCTGCCGCCTCTTTATGAAGATTTGGTGATCGATCAAAAGCCCCTGAGCATTATTTCATCTTCACCCCCAAATGCAAATTGTGAAAGTGCTGCTAACAGCTTCAACGAGCTTTCAATGATAGTGGCAAGTGGGTCTTCGAATTCTTGCAAGAATGAGGAGAGGGAGGAGGGATCGAGGCCAAGTGGTAGGAAGAAGAAGACTTGTTCATTGGAATTGGGTGAGATAAGGAATTACTTTGATGTTCCAATTACCAAAGCTGCGAAGCAGTTGAATGTGGGATTGACCCTGTTGAAGAGGAGGTGCAGAGAGCTCAACATAATGAGATGGCCACATAGGAAAATTAAGAGCTTGAATTCACTCATCAATAATGTGAAGGAAATGGGGTTGACCGAAGAGGTAGCTATGTTGGAACGGCACAGAATGCTGGTTGAGAAGTTACCTGATATGGAACTCACTGAAGAAACCAAGAGGCTGAGGCAAGCCTGTTTCAAAGCTAATTACAAGAGGAGAAAATACCTGACCATGTA 662 0.4456 MEFSPLEGFFDFDSVPFPYQRDQLCFSEFPMLEDFGSNFASAEYNLPPLYEDLVIDQKPLSIISSSPPNANCESAANSFNELSMIVASGSSNSCKNEEREEGSRPSGRKKKTCSLELGEIRNYFDVPITKAAKQLNVGLTLLKRRCRELNIMRWPHRKIKSLNSLINNVKEMGLTEEVAMLERHRMLVEKLPDMELTEETKRLRQACFKANYKRRKYLTM 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01941 220 PANTHER PROTEIN RKD1-RELATED 71 217 - -
Bva12g01941 220 ProSiteProfiles RWP-RK domain profile. 99 183 IPR003035 -
Bva12g01941 220 PANTHER PROTEIN RKD4 71 217 IPR044607 GO:0003700
Bva12g01941 220 MobiDBLite consensus disorder prediction 94 111 - -
Bva12g01941 220 Pfam RWP-RK domain 115 162 IPR003035 -
Bva12g01941 220 MobiDBLite consensus disorder prediction 90 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01941 Bva-Chr12 15428226 15429827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01941 115 218 AtRKD Transcription Factor Family AT5G53040 69.231 2.18e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bva12g01941 RWP-RK 3.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01941 - - aprc:113850801 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01941 12 15428226 15429827 Bva12g01941 12 15428226 15429827 ECH