Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01893 ATGAGTGAATTTGGCGTTTCAGACAAGGAacctaaaaaaaatagcaGCACTGGTGGTGTTCTTGGGTTGGGTGTGAAGCTGCAGAGTCTTGAAGCATTCCCTAGTAAGgcgatgatgatgatggtgcATCAAAATCATCACCACCGTCCATTATCATCACCGTTTGATAATGATTCCTCTCCTGCTGCTGGTGATGGACATGGTCCCACGGCTTACATGTCTATGACTAATCATGTAATAAACGATGTTGTTGTTAGTGGTGCTTCTGCTCCTGGTGCTGCTGCCGCTGTTCATAGTGATGGTGCTGCACCTGTAAGACCTTTGCAGCCTTTTGACATTTCTAACTCTGTTTCTGCAACCACCACTCGCACCGCCTTCAAATCCCCAgCAGCAGGGGGAATGGCGGCTTCATTGGGTTTTCCTTTCACAAGTGCACAATGGAGAGAGCTTGAAAGACAAGCTATGATATACAAGTACATGATGGCTTCTGTTCCCGTTCCTTCTGATCTCCTCATCCCTACCTCACTTCCTCCTGCTTCTCGCTCTCCCATGGATGGTGGTTTCAATCTAAGGTTGTCCAGCGGTACTGATCCAGAGCCAGGTAGATGCAGGAGAACAGATGGAAAAAAATGGAGATGCTCTAGAGATGTGGCGCCTAACCACAAGTATTGTGAGCGTCACATGCACAGAGGCCGTCCGCGTTCAAGAAAGCATGTGGAAGTTCATGCCAATAgcaacaacagcagcagcagcaataACAATCAGCAAATCAAGAGGGCTCGCCATGATTATTATCCCTTCCCTGCATCTGCTGTTACTGTTGCTATTTCTAATCCCGCAATCAGGAAAGATGTACCTTCATCCCAGTTTCTTGGTTCTACTACCAGTCAGCCATACCTTGAATCTTCCCTTTCTCTTGATAAATTTGGTGTCAAAGCTGCTAATTGTGATCCCATGGTTTCTGCTTCATCAGACAAAGAACCCAGGAGCTTGGAGTGGATGCTGAAAGGAGACCCTGTTTCCATGGGTGGTTCTAATCGAGTATGGACGCCTCTGATGGCGGACAAAGTTGGATTGACCACTGACAGTTGCTGTAACAACAACGCTGTTATTTCTAGTCCAAATTACCAAGAGCCTCTGTACATGAATTCTTATGGGATTTTTAGTTCTGGACTAGATCAACAAAACAGACGCTGTCCACCTTCCTTCTTCAATCCTCTTGCTGTTCCCTTGGAAAATCCACTGTCTGTAAAGCCAAGGGGTTTCATTGATGCTTGGTCTAATGCAGAAACAGAGGAAAACAATGCCAACGTCAACAAGACCTCTGTCACATCAAATGGTAAATTATCGCTATCCTTTCTTGATCTATCCATGAGTGGTGGTGGTTCTGTTGATGGCGAAGTGGGTGATATTCAAATGGGTTTAGGCCTAATGGAAGCTGATGGGAACACTGGAAGTAATAATGGTACTAAAAGCCATGTCGAAAGTTGGCTCACACCTGCACCTTGGGTGGGTTCAAGTACACCTGGGGGTCCACTAGCTGAGGTTCTAAGGCCGAGCACGGTGGCTACTACCAATGATGCACCGTCTAATCCATCTTCTCCGGTGATAACCAATGCTGAATCAGGTAGTCCTCTGGCTACAATGGTTTCTTCGCCATCTGGGGTTCTGCAGAAAACTTTTACTTCGTTATCTGATAGTAGCAGCAACAGTAGCCCAACGGTTGCTAGTTCAAAGACCAGTTCTGAGATTGGCTTGCTCTGGTCATCCTCAGCAAATTA 1781 0.4475 MSEFGVSDKEPKKNSSTGGVLGLGVKLQSLEAFPSKAMMMMVHQNHHHRPLSSPFDNDSSPAAGDGHGPTAYMSMTNHVINDVVVSGASAPGAAAAVHSDGAAPVRPLQPFDISNSVSATTTRTAFKSPAAGGMAASLGFPFTSAQWRELERQAMIYKYMMASVPVPSDLLIPTSLPPASRSPMDGGFNLRLSSGTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKHVEVHANSNNSSSSNNNQQIKRARHDYYPFPASAVTVAISNPAIRKDVPSSQFLGSTTSQPYLESSLSLDKFGVKAANCDPMVSASSDKEPRSLEWMLKGDPVSMGGSNRVWTPLMADKVGLTTDSCCNNNAVISSPNYQEPLYMNSYGIFSSGLDQQNRRCPPSFFNPLAVPLENPLSVKPRGFIDAWSNAETEENNANVNKTSVTSNGKLSLSFLDLSMSGGGSVDGEVGDIQMGLGLMEADGNTGSNNGTKSHVESWLTPAPWVGSSTPGGPLAEVLRPSTVATTNDAPSNPSSPVITNAESGSPLATMVSSPSGVLQKTFTSLSDSSSNSSPTVASSKTSSEIGLLWSSSAN 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01893 593 MobiDBLite consensus disorder prediction 1 20 - -
Bva12g01893 593 Pfam QLQ 141 173 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva12g01893 593 MobiDBLite consensus disorder prediction 242 256 - -
Bva12g01893 593 Pfam WRC 198 240 IPR014977 -
Bva12g01893 593 SMART QLQ_2 140 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva12g01893 593 MobiDBLite consensus disorder prediction 46 70 - -
Bva12g01893 593 ProSiteProfiles QLQ domain profile. 141 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva12g01893 593 ProSiteProfiles WRC domain profile. 197 241 IPR014977 -
Bva12g01893 593 MobiDBLite consensus disorder prediction 228 256 - -
Bva12g01893 593 PANTHER GROWTH-REGULATING FACTOR 7 94 581 - -
Bva12g01893 593 MobiDBLite consensus disorder prediction 560 593 - -
Bva12g01893 593 PANTHER - 94 581 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01893 Bva-Chr12 15203313 15206479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01893 422 570 GRF Transcription Factor Family AT5G53660 41.509 4.56e-15 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Bva12g01893 WRC 1.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01893 - - gmx:100803096 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01893 12 15203313 15206479 Bva06g03026 06 18794744 18797681 ECH
Bva12g01893 12 15203313 15206479 Bva12g01893 12 15203313 15206479 ECH