Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01867 ATGGGAGCTCGTGCTGAAGAGATGGCTGTGATGTCTCTAAATTCTCTGCCTCTTGGTTTCCGATTCCGGCCCACGGATGAGGAACTCATTGATTACTACTTGCGAGAGAAGATCAACGGAAACGATGACGAAGTTAGGGTTATTCAAGAAATTGATGTCTGCAAATGGGAGCCATGGGATTTACCAGATTTGTCGGTGATACAGTCCAAGGATCCGGAGTGGTTCTTTTTCTGTCCCCAGGACCGCAAGTATCCAAATGGGCATCGATTGAACCGGGCAACAACTAATGGCTACTGGAAGGCAACGGGGAAGGATCGCAAAATTAAATCTGGGACGATGTTGATTGGAATGAAGAAGACTTTGGTCTTCTATACTGGTCGTGCGCCCAAAGGGAAGAGGACTAATTGGGTTATGCATGAGTACCGTCCTACCTTAAAGGAGCTGGATGGTACCAATCCTGGACAGAATGCGTTTGTCCTTTGTCGTTTATTTAAGAAACAAGATGAAAGTCTTGAATGTTCAAATGTGTCCCCATCACAGGCCACCGAAGATCAAAAGCACCATGGAGTTCCATTATGTGCCACTGAGAACTCTGAAGAAGCTACATCTAATGTTATAACATTGGCTGATTGCCAGAGTGATGGATGTGATGTTGATGATGCCCTACATCAAATGGCACAACCAACAGCTGCTGAGTTGGGGAGCTTAGACTTCTTATTCAACCCAACAAGTGAGTCATGGGATGACAAATTGTTTTCCCCTGAACATGCTCATATGCCACAAGACATTTATTACCAAGTAAATAATGAATCAGAGTATGGGACAAATGATGGAAGTTTAGCAGAGTTCTTGGACTCAGTTGTTAATTGGGATGAGTTCTCATGTGAGGTGTCCAGCCCTCAGAAGCCAATCTCCGCCATTTCTTGTCCTAAGGACAATGGATCAGGCAGTGAGTCAGATGTGGAAATGGCCAGTATACCATTTGTGCCAATTTTGCAAACTGGATGGCCTGAGGAGAACCTTGACAGAAGACCTCCTTTGATGGGGGCGGCTGCAGAAGTTTACAGGACCATCTCCTCTGACGTCAGTGGAAATCATCACAAGAGCAATATGGGGTTATTACAGAACAATTCCCAGATGGCTTCTTTACCTGTTGTTGCTGCCGGCCAAGCGCACAATGTGTGTGGTGATAATGGTACTGGAATCAAGATAAGGAGTCGCGGCCAAGCACGAAATGAATTTCCTCAAATAAATCCACCGAACCAAGGTACTGCACCAAGAAGGATACTCCTTCAGGTGGCACGCACCCGTCAGGCATCTCAAGCGGCAAGCTGCAAACCAGAAGACGATGATTCAAAACCAGTCATTGCAGCGGAGAGGGAAGTTTCAGAGAATCATGCTGCTGATGAGAGTTCTACTGATGATACCAAGATTGTGAATGAACCCCATAAGACGTCTCTTGAATCAACTGACAAGAGTAAGATTTCTCAGCAACATGTTACAAAGACGGATTCCATCTCGGAGTTAAAAGAGGCTTTATTGTCTGAAGGGGTCCCTTACAAATCAAAGCCTTACTCTAGCCGCAAAATCTGGTcgtcttttgtttttgttgtcttGGTCGTGATGTTAGTAGTCTTCTTTGCTAACATATGGggatatcttaaattttg 1670 0.4425 MGARAEEMAVMSLNSLPLGFRFRPTDEELIDYYLREKINGNDDEVRVIQEIDVCKWEPWDLPDLSVIQSKDPEWFFFCPQDRKYPNGHRLNRATTNGYWKATGKDRKIKSGTMLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNAFVLCRLFKKQDESLECSNVSPSQATEDQKHHGVPLCATENSEEATSNVITLADCQSDGCDVDDALHQMAQPTAAELGSLDFLFNPTSESWDDKLFSPEHAHMPQDIYYQVNNESEYGTNDGSLAEFLDSVVNWDEFSCEVSSPQKPISAISCPKDNGSGSESDVEMASIPFVPILQTGWPEENLDRRPPLMGAAAEVYRTISSDVSGNHHKSNMGLLQNNSQMASLPVVAAGQAHNVCGDNGTGIKIRSRGQARNEFPQINPPNQGTAPRRILLQVARTRQASQAASCKPEDDDSKPVIAAEREVSENHAADESSTDDTKIVNEPHKTSLESTDKSKISQQHVTKTDSISELKEALLSEGVPYKSKPYSSRKIWSSFVFVVLVVMLVVFFANIWGYLKF 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01867 556 MobiDBLite consensus disorder prediction 460 497 - -
Bva12g01867 556 SUPERFAMILY NAC domain 8 166 IPR036093 GO:0003677|GO:0006355
Bva12g01867 556 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Bva12g01867 556 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Bva12g01867 556 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Bva12g01867 556 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 9 390 - -
Bva12g01867 556 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 390 - -
Bva12g01867 556 MobiDBLite consensus disorder prediction 434 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01867 Bva-Chr12 15089738 15093229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01867 6 288 NAC Transcription Factor Family AT3G49530 47.785 3.14e-94 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva12g01867 NAM 1.2e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01867 12 15089738 15093229 Bva06g03059 06 18935673 18939178 ECH
Bva12g01867 12 15089738 15093229 Bva12g01867 12 15089738 15093229 ECH