Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01866 ATGAATATAAGAAGCTTCGCTGGTGGCATTGTGAAACCCAGTTCTTTGCTTGTGCTAACAGAAATGCCTATTCTAACATTTGGTAGTTCCAAGCTGAATGCTACTTTAGCTCTTCGGTTACCATGTAACCGGGTGGCAGGGATTGGGTTGATTACAAGATTTCAGTATTCTGTTGCTGATAGAACCTTGACTTCTAGGTCTGCGGATTCACCGTCTTCTAAACCAGGCTCCTCTCGCTTGAATAGGAAACGGGAAAGTTCCTCGTCATCATTATATAGTCGTCCTAGCTTATCAGATATGAAGAAAGATAGGATAGCAAATTGTGTTAAGGTTTATGAATGTCTGAGGGGAATTGGTATTGTCCCTGATGAGCTTGACGGTCTGGAACTTCCAGTAACAGTTGAGGTTATGAGGGAACGTGTAGATTTTCTTCACAATTTAGGGCTCACAATAGAAGACATTAACAACTATCCACTTGTTCTTGGCTGTAGTGTCAAGAAGAACATGATTCCTGTGCTTGATTACCTTGGTAAATTGGGTGTCAGGAAATCTACATTCACACAGTTCTTGAGGAGATACCCTCAAGTCCTTCATGCTAGTGTTGTTATTGATCTTCAACCAGTGGTCAAGTATCTTCAGGGGATGGATATAAAGCCCAGTGATATTCCTCGGGTTCTTGAGAGGTACCCAGAAGTGCTTGGATTCAAGCTTGAGGGAACCATGAGTACCTCTGTCGCTTATTTGGTTGGAATTGGTATAGCAAGAAGAGAAATTGGAGGGGTTTTGACTAGATATCCTGAGATTTTGGGAATGCGAGTTGGCAGAGTGATCGAGCCTTTTGTGGAATACCTGGAAAGCTTGGGAATTCCAAGATTAGCCATTGCTAGACTGATAGAGAAACGACCTCATATGCTTGGCTTTGGACTGAACGAGAAGATGAAGCCAAATGTTGAATCCCTTGAAGAATTTAATGTTAGAAGAATGTTAATTCCCTTTGTAATTGCCCACCATCCCGAGATTATTGGAATTGACCTAAAACCAAAGCTTGtcaatcaaagaaatttaCTCAATTCTGTACTTGATATGGGTGCTGAGGATTTTGGCAGAGTTATCGAGAAGATGCCACAGGTGGTCAGCCTCGGCAGTGCGCCTATGCTGAGGCATGttgattttcttaaagaatGTGGATTTTCCTTGCCACAAATGAGAGAGATGATTGTTGGATGCCCACAGCTACTTGCTTTAAATATTGACATCATGAAGCTTAGCTTTGGTTACTTgcaaatggaaatgaaaagacCTTTGGAAGAATTGGTTGCTTTCCCTGCATTCTTCACTTATGGCTTCGAGTCAACTGTAAAACCTAGGCATAAGATGGTTTCCAAGAAGGGATTGAAGTGTTCTCTTGCATGGATGCTTAATTGTTCTGATGAGAAGTTTGAGCAACGAATGAATTATGACACTATTGACATCGAGGAGATGGAAATGGAACCATCATTTGACATGAATTCACTGATGGAACCAAGGAGTGATGAGTCAGATTCTGATTATGAAGATAGTGATCGTGATGATGTATA 1577 0.4039 MNIRSFAGGIVKPSSLLVLTEMPILTFGSSKLNATLALRLPCNRVAGIGLITRFQYSVADRTLTSRSADSPSSKPGSSRLNRKRESSSSSLYSRPSLSDMKKDRIANCVKVYECLRGIGIVPDELDGLELPVTVEVMRERVDFLHNLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTQFLRRYPQVLHASVVIDLQPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGIARREIGGVLTRYPEILGMRVGRVIEPFVEYLESLGIPRLAIARLIEKRPHMLGFGLNEKMKPNVESLEEFNVRRMLIPFVIAHHPEIIGIDLKPKLVNQRNLLNSVLDMGAEDFGRVIEKMPQVVSLGSAPMLRHVDFLKECGFSLPQMREMIVGCPQLLALNIDIMKLSFGYLQMEMKRPLEELVAFPAFFTYGFESTVKPRHKMVSKKGLKCSLAWMLNCSDEKFEQRMNYDTIDIEEMEMEPSFDMNSLMEPRSDESDSDYEDSDRDDV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01866 525 Gene3D Transcription termination factor 3, mitochondrial 138 276 IPR038538 -
Bva12g01866 525 Gene3D Transcription termination factor 3, mitochondrial 277 489 IPR038538 -
Bva12g01866 525 SMART mt_12 368 398 IPR003690 GO:0003690|GO:0006355
Bva12g01866 525 SMART mt_12 151 182 IPR003690 GO:0003690|GO:0006355
Bva12g01866 525 SMART mt_12 88 121 IPR003690 GO:0003690|GO:0006355
Bva12g01866 525 SMART mt_12 435 466 IPR003690 GO:0003690|GO:0006355
Bva12g01866 525 SMART mt_12 223 254 IPR003690 GO:0003690|GO:0006355
Bva12g01866 525 SMART mt_12 331 365 IPR003690 GO:0003690|GO:0006355
Bva12g01866 525 SMART mt_12 187 218 IPR003690 GO:0003690|GO:0006355
Bva12g01866 525 SMART mt_12 259 290 IPR003690 GO:0003690|GO:0006355
Bva12g01866 525 SMART mt_12 295 326 IPR003690 GO:0003690|GO:0006355
Bva12g01866 525 SMART mt_12 403 434 IPR003690 GO:0003690|GO:0006355
Bva12g01866 525 Pfam mTERF 173 481 IPR003690 GO:0003690|GO:0006355
Bva12g01866 525 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 52 514 - -
Bva12g01866 525 MobiDBLite consensus disorder prediction 65 95 - -
Bva12g01866 525 MobiDBLite consensus disorder prediction 500 525 - -
Bva12g01866 525 PANTHER CGI-12 PROTEIN-RELATED 52 514 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01866 Bva-Chr12 15085201 15088200 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva12g01866 mTERF 4.5e-103 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01866 K15032 - gmx:100785223 765.763