Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01864 ATGGATGCTACAGAGAAATTCCCAGACAATCGTAAAGCGAAAAATTCACAAAGGGACAAGAACAGAGTAAGCTTTTCTGCTAGCTTGCCCAGTGACGTAAGTGATACTTTTGCTGATAGTTTTTGTGCAGTGAAGTTCTCTGCCAACCCTTTTATGGATATAAGAGAATCAATTCTGGAGATGATTCTCAACGTGGGAGTTAACAGTTGGGAAGAAATGGAGGAGCTTGTGTACTGTTACGTAGCTCTCAATCCACCACAGCTTCATGATATCATTGCAGAAGCATTTGTTAGTCTCTTTTGTCCACTTTGCAAACAAGGGCTAATCTA 329 0.4073 MDATEKFPDNRKAKNSQRDKNRVSFSASLPSDVSDTFADSFCAVKFSANPFMDIRESILEMILNVGVNSWEEMEELVYCYVALNPPQLHDIIAEAFVSLFCPLCKQGLI 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01864 109 ProSiteProfiles OVATE domain profile. 43 102 IPR006458 -
Bva12g01864 109 MobiDBLite consensus disorder prediction 1 19 - -
Bva12g01864 109 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 44 103 IPR006458 -
Bva12g01864 109 Pfam Transcriptional repressor, ovate 47 101 IPR006458 -
Bva12g01864 109 MobiDBLite consensus disorder prediction 1 32 - -
Bva12g01864 109 PANTHER OVATE FAMILY PROTEIN 5 12 102 - -
Bva12g01864 109 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 12 102 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01864 Bva-Chr12 15075930 15076259 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Bva12g01864 Ovate 8.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01864 - - pper:18784630 122.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01864 12 15075930 15076259 Bva12g01864 12 15075930 15076259 ECH