Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01863 ATGGCAATTGTGTTGAGTATGTTACTGGTGCAAGTCTTTGCAGCAGGGTTGCAGCTGTTGTCAAGAGTTGTGTTGGTAAAAGGcactttcatttttgctcTCATTGCTTATCGCCATATTGTTGGTGCCGTTTGCGTTGCCCCTTTTGCTTTCTACTTGGAAAGAGGCGGAGTGAAGAAGCTGGGCTGGTCTGCTTCGTTCTGGCTCTTCCTTAATGCTTTGGTTGGGATCACAATGGCTATGGGATTCTTCTATTATGGTCTGAGAGACACTTCTGCTACTTACTCTGTGAACTTTCTCAACTTGATCCCAATTTTCACTTTCCTTGTCTCTATCATTTTCAGAATGGAGAAACTAGGGCTGGAAACATGGGCAGGAAAAGCCAAAACCGTGGGGGCAATTTTGTGTGTTGGCGGAGCATTAACTTGTAGTATTTACAAGGGCGCAGCCTTCCACATTGTTCATCATAGTGTTTCCACTCGGATTACAGTTGATTCGTCAAAAACAAACATGCTTCGTGGCACACTCTTTCTCGTTGCTAGTTGCTTGTCATATACACTGTGGTACATTGTGCAAGTTAAAATGCTCAAAGCATTTCCATTTAAATATTGTGCAACGATGCTGACGTGCATCCTGGCATCAATGCAAGCAGCAGTTGCAGGGTTATGCATAAACAGAAGTACATCGGCATGGAAGTTAGGATGGGATCTACAACTGATTACCATATTATACTCGGGTGCATTGGCTACAGCCGCTACATTTTGCTTAATCTCATGGGTGATTGCAAAAAAGGGACCTACTTATCCTCCAATGTTCAATCCACTGGCTCTTGTTTTCGTGGCTGTATCAGAAGGCGTCTTCTTGGGTGTTCCAATCAGACTTGGAATATTGCTGGGCATGGTTTCGATTATTTGCGGTTTGTACTCTTTCTTATGGGGTAAAAGAAGGGAGATGAAGACCTTGCCTCAAGCAAATGTTGCAGCTGGAGAAGTATTAACTGGCATCACTCCTAGTGCTCCTGGGTCGCAATCAACAGCCGCGGTAATGCCAAGTTCTTCACCTGAAAACGTAGAGCTTCGAGTTGGAAAATTTGACACAAGCACAAAACATCCCTG 1115 0.4359 MAIVLSMLLVQVFAAGLQLLSRVVLVKGTFIFALIAYRHIVGAVCVAPFAFYLERGGVKKLGWSASFWLFLNALVGITMAMGFFYYGLRDTSATYSVNFLNLIPIFTFLVSIIFRMEKLGLETWAGKAKTVGAILCVGGALTCSIYKGAAFHIVHHSVSTRITVDSSKTNMLRGTLFLVASCLSYTLWYIVQVKMLKAFPFKYCATMLTCILASMQAAVAGLCINRSTSAWKLGWDLQLITILYSGALATAATFCLISWVIAKKGPTYPPMFNPLALVFVAVSEGVFLGVPIRLGILLGMVSIICGLYSFLWGKRREMKTLPQANVAAGEVLTGITPSAPGSQSTAAVMPSSSPENVELRVGKFDTSTKHP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01863 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 37 137 - -
Bva12g01863 371 MobiDBLite consensus disorder prediction 338 352 - -
Bva12g01863 371 PANTHER WAT1-RELATED PROTEIN 5 326 - -
Bva12g01863 371 MobiDBLite consensus disorder prediction 338 371 - -
Bva12g01863 371 Pfam EamA-like transporter family 3 135 IPR000620 GO:0016020|GO:0016021
Bva12g01863 371 Pfam EamA-like transporter family 173 310 IPR000620 GO:0016020|GO:0016021
Bva12g01863 371 PANTHER WAT1-RELATED PROTEIN 5 326 IPR030184 GO:0016021|GO:0022857
Bva12g01863 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 218 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01863 Bva-Chr12 15072471 15076405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01863 5 314 Nodulin-like Gene Family AT1G09380 34.069 8.79e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01863 - - gmx:100780316 491.5