Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01836 ATGAAGTTTCAGTCCTCTATTGCGGCATTTGTTTTCCTAAGTTTCATACTGTCTCACTTTGGCTTCATTGTCGCTGACCTGAACTCTGACAGACAAGCTCTCACCGAGTTTTCTTCTGTTGTTCCACATGCCAGAAAACTGAACTGGAACATTTCTTCCCCAGTTTGTTCCTCCTGGCTTGGTGTGACTTGCAACTCCAATGGAACCCGTGTGGTTGCCATCCATCTTCCAGGAGTTGGATTTGCAGGTTCCATTCCAGAAAACAGCATAGGAAAACTAGATGCTCTTAAGACCTTGAGCCTTCATTCCAATGGCCTTAGTGGAAATCTTCCTTCTGATATCCTCTCCATTCCTTCCCTCCAATGTGTCTATCTCCAGCATAATAACTTCTCAGGTCCAATTCCTTCCTCTATTTCCCCTAAACTCGTTTCTTTGGATATTTCTTTCAACTCCTTCTCTGGCAGTATCCCACCTGCATTTCAGAATCTTAGGAGACTCACCTGGTTGTACCTCCAACACAATTCCATCTCCGGACCTATCCCTGACATCAACCTCCCAAGACTgaagtttttgaattttagcTATAACTACTTGAATGGATCGATTCCAAGTTCCCTCCAAAAATTCTCTTACGATTCTTTTGTTGGGAACTCCCTCTTATGTGGGCCACCTCTTAATCGTTGCTCTTCAACCaccttttctccttctccttcccCTGTTTATGAGCCACACTCTCCAGCAACTACCGAAAATGGAAAGGCTACCACTCATAAGAAAAGCTTTGGCGTAGCTTCTATACTTGCTCTAGCAGTTGGTGGCTTCGCATTCCTCTCTGTCTTTATTTTAGTGATAACTATACGCTATTTCAGGAGGAAAAACAGTCAAAGCAGTGACATTCTGAAAGGAAAGGCATCTTGTGCTGGAAAGCCTGCAGTGAACTCAAAGGATTTTGGGAGTGGGGTGCAAGAGGCTGAGAGGAAcaagttgtttttctttgaaggTTCCTCTCATAGCTTTGACCTTGAGGATCTGTTAAAGGCTTCAGCAGAAGTTCTTGGAAAGGGTAGCTATGGAACAGCTTACAAGGCTGTTTTGGAAGATGGAACAACGGTGGTAGTTAAAAGGTTGAAAGAAGTTGTGGTTGGAAAGAGAGAGTTTGAGCAGCAGATGGAGGTTGTGGGAAAATTTGGACGGCACCCTAATGTCATGCCCCTTCGAGCTTATTACTATTCCAAAGATGAAAAACTTCTAGTTTACAACTACATGCCGGGGGACAGCTTGTTTGCCTTGTTGCACGGGAACAGAGGTGCAGGAAGAACTCCATTAGACTGGGATTCAAGAATGAAGATTTTACTTGGAACTGCCAAAGGAATTGATTTCATCCACTCAGAGGGAGGTCCAAAGTTTACTCATGGCAACATAAAATCTTCCAATGTTCTCATAACTCAAGACCTTGAGGGTTGCGTATCTGATATTGGATTAACTTCTGTGATGAATTCTCCTGCAACCATATCTAGAGCAAATGGCTACCGTGCTCCGGAGGCAGCCGATTCCCAGAAGATCACCCACAAGTCTGATGTTTACAGCTTTGGTGTGCTCCTCCTTGAAATGCTGACAGGTAAAATCCCACTGAGATATCCAGGGTACGATGATGTTGTTGATCTGCCAAGGTGGGTCAAGTCTGTTGTCCGTGAGGAATGGACAGCTGAAGTTTTTGACGAAGAGCTACTAAGAGGACAGTATGTTGAAGAGGAAATGGTGCAAATGCTTCAGATTGCACTGGCTTGTGTGGCAAAGGTGCCAGAAATGAGGCCTAGAATGGACGAAGTTGCTCGAATGATAGAGGAAATTAAGCACCCTGAGTTGAAGAACAGGCCATCTTCTGAGTCCGAGTCTAACGTGCAAACACCATG 1913 0.4323 MKFQSSIAAFVFLSFILSHFGFIVADLNSDRQALTEFSSVVPHARKLNWNISSPVCSSWLGVTCNSNGTRVVAIHLPGVGFAGSIPENSIGKLDALKTLSLHSNGLSGNLPSDILSIPSLQCVYLQHNNFSGPIPSSISPKLVSLDISFNSFSGSIPPAFQNLRRLTWLYLQHNSISGPIPDINLPRLKFLNFSYNYLNGSIPSSLQKFSYDSFVGNSLLCGPPLNRCSSTTFSPSPSPVYEPHSPATTENGKATTHKKSFGVASILALAVGGFAFLSVFILVITIRYFRRKNSQSSDILKGKASCAGKPAVNSKDFGSGVQEAERNKLFFFEGSSHSFDLEDLLKASAEVLGKGSYGTAYKAVLEDGTTVVVKRLKEVVVGKREFEQQMEVVGKFGRHPNVMPLRAYYYSKDEKLLVYNYMPGDSLFALLHGNRGAGRTPLDWDSRMKILLGTAKGIDFIHSEGGPKFTHGNIKSSNVLITQDLEGCVSDIGLTSVMNSPATISRANGYRAPEAADSQKITHKSDVYSFGVLLLEMLTGKIPLRYPGYDDVVDLPRWVKSVVREEWTAEVFDEELLRGQYVEEEMVQMLQIALACVAKVPEMRPRMDEVARMIEEIKHPELKNRPSSESESNVQTP 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01836 637 MobiDBLite consensus disorder prediction 234 253 - -
Bva12g01836 637 CDD STKc_IRAK 352 617 - -
Bva12g01836 637 PANTHER RECEPTOR-LIKE KINASE 4 636 - -
Bva12g01836 637 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Bva12g01836 637 Gene3D Transferase(Phosphotransferase) domain 1 422 635 - -
Bva12g01836 637 Gene3D Ribonuclease Inhibitor 141 230 IPR032675 -
Bva12g01836 637 Gene3D Ribonuclease Inhibitor 29 140 IPR032675 -
Bva12g01836 637 SUPERFAMILY L domain-like 40 226 - -
Bva12g01836 637 Pfam Leucine Rich Repeat 187 209 IPR001611 GO:0005515
Bva12g01836 637 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Bva12g01836 637 Gene3D Phosphorylase Kinase; domain 1 313 421 - -
Bva12g01836 637 PANTHER OS05G0588300 PROTEIN 4 636 - -
Bva12g01836 637 SUPERFAMILY Protein kinase-like (PK-like) 350 617 IPR011009 -
Bva12g01836 637 Pfam Protein kinase domain 350 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01836 637 ProSiteProfiles Protein kinase domain profile. 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01836 637 MobiDBLite consensus disorder prediction 617 637 - -
Bva12g01836 637 ProSitePatterns Protein kinases ATP-binding region signature. 352 383 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01836 Bva-Chr12 14930109 14934346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01836 3 635 Receptor kinase-like Gene Family AT5G58300 56.786 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva12g01836 Pkinase 4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01836 - - aprc:113868460 983.015