Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01834 ATGAGCGCCATGGCTACAACAAGCCAAGGCGTCTTCTCAGCTCTTGACAATGCCAAGACACAAAGGTACCATTACATGGCAATTGTGATTGCTGGGATGGGATTCTTCACCGATGCATATGATCTCTTCTGCATCACTGCTGTGTCCAAGCTCATAGGTCGCTTGTATTTCTTTGACTCCACTAGTCAAAAGCCCGGGAAACTTCCAACCCAAGTAAACAATGCCATAACTGGTGTGGCTTTGTGTGGTACCCTTGTGGGGCAACTCTTCTTTGGCTGGCTCGGTGACAAACTCGGAAGGAAAAAAGTTTATGGGATAACCCTTACCATTATGGTAGGTTGCACCTTGGCATCAGGGCTTTCCTTTGGTGCCACTGCTAGGAGTGTGGTTACTACACTCTGCTTCTTCCGGTTCTGGTTGGGTTTCGGCATTGGAGGGGACTACCCTCTATCTGCCGTTATAATGTCTGAATATGCTAATCAGAAAACCAGAGGAGGGTTTATTGCTGCTGTGTTTGCAATGCAAGGATTTGGAATCTTGTTTGCTGGCGGTGTTGCCTACGTCTTCTCCAAAATATTCTTAGATGCTAACCCAGCTCCTGATTATGAAACTTACCCTGTGCTATCTACTCAACCAGCAGGAGATTTCCTTTGGAGAATTGTGCTTATGTTTGGTGCCATTCCTGCAGCTCTGACCTATTATTGGCGAATGAAAATGCCAGAAACTGCTAGATACACTGCCTTAGTAGAAGGAAACCATCACAAGGCTGCTGCAGACATGGCCAAAGTTCTTGACACAGAAATAGCTGTGGAAGAATCAGGTTCCAGGGCTGCTGTAGACATGGTCAAAGTTCTTGATATAAACATAGCTGTGGAAGAAGCAGGTTCCGGGCCTGCTGCCAACCCAAACCCAAGCCCTTCTTATGGATTCCTTTCTTCCGAGTTTATAAATAGGCATGGACTTCACCTTTTGGGGACTACCAGCACATGGTTCTTGTTAGATATTGCCTTCTATAGTCTTCAACTTGCACAAAAGGACATTTACCCAGCTACTGGGTATGTGGACAAGGCGTCAAAAATGAATGCCATAGAAGAGGTACATCAACTCTCCAAAGCAATGCTTGTGGTGGCTCTCCTGGCTACTGTCCCCGGGTATTGGTTCACCGTGTTTCTCATTGACAACATTGGAAGGTTCAAAATCCAGCTTGGTGGCTTTCTATTAATGTCTATTTCTATGTGGTTCCttggaaaaaattatgagaaatataGAGGAGAGAAGGAAAATTGCCACTCGGATTCAAAGCAGGACTATTGTGGTGGCGATACCACAATGTTCCTCATACTTTTTGGAGTTACCCTCTTCTTTGCCAACTTTGGACCCAATAGCACAACATTCATAGTGCCGGCAGAGCTGTTCCCGGCGAGGTTCCGGTCAACATGCCACGGCATATCTGCAGCAGCTGGAAAAGCAGGAGCTATCATTGGTGCGTTTGTGGTGCAGAGCTACGCCGGTGATTCAACAAGTGGAATCAAGACGGCAATTAAGGCACTTGCAATTGTTAACTTTCTTGGATTCCTTTTCACTTTCCTTGTGCCAGAAACAAATGGTCGCTCCCTAGAGAATATCTCCGGAGAGAATGTAGAACTTGCTTCCAAAATTAGTCCAGAGActgcaaatgaaaaaaaaggaaacgcTGATGCTGGCAATTCTTCAGGAAGCGTAGTGGTCTA 1730 0.4486 MVGCTLASGLSFGATARSVVTTLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGGFIAAVFAMQGFGILFAGGVAYVFSKIFLDANPAPDYETYPVLSTQPAGDFLWRIVLMFGAIPAALTYYWRMKMPETARYTALVEGNHHKAAADMAKVLDTEIAVEESGSRAAVDMVKVLDINIAVEEAGSGPAANPNPSPSYGFLSSEFINRHGLHLLGTTSTWFLLDIAFYSLQLAQKDIYPATGYVDKASKMNAIEEVHQLSKAMLVVALLATVPGYWFTVFLIDNIGRFKIQLGGFLLMSISMWFLGKNYEKYRGEKENCHSDSKQDYCGGDTTMFLILFGVTLFFANFGPNSTTFIVPAELFPARFRSTCHGISAAAGKAGAIIGAFVVQSYAGDSTSGIKTAIKALAIVNFLGFLFTFLVPETNGRSLENISGENVELASKISPETANEKKGNADAGNSSGSVVV 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01834 466 Gene3D MFS general substrate transporter like domains 1 155 IPR036259 -
Bva12g01834 466 Gene3D MFS general substrate transporter like domains 197 449 IPR036259 -
Bva12g01834 466 PANTHER PHOSPHATE TRANSPORTER 160 445 - -
Bva12g01834 466 PANTHER PHOSPHATE TRANSPORTER 1 168 - -
Bva12g01834 466 Pfam Sugar (and other) transporter 260 433 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bva12g01834 466 Pfam Sugar (and other) transporter 6 157 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bva12g01834 466 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 426 IPR020846 GO:0022857
Bva12g01834 466 MobiDBLite consensus disorder prediction 444 466 - -
Bva12g01834 466 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 160 445 - -
Bva12g01834 466 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 168 - -
Bva12g01834 466 SUPERFAMILY MFS general substrate transporter 4 432 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01834 Bva-Chr12 14922780 14924180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01834 1 435 Inorganic Solute Cotransporters AT5G43350 56.600 4.68e-168 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01834 K08176 - gmx:100820250 612.453