Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01824 ATGGGTATCCCTGACCCTGAAAATGTGATGACGGTCAAAAGAGTGATCAGAGAGCTTGTTCAAGGTCAAGAGTCTGCAACCCAGCTCAAGGGTTTAGTTCAGAAACAATCTGGGGTTGATGGGTCCCTCTCAGCTGAGGAGCTTGTGGCCAAAATACTGAGATCTTTTACTGAGAGTCTGTCTGTGCTGACCGCCACCGGTGTTGAAGTTTCTCAGAATTTTCCGGCTGTTTCTGGGGAGAATGGTTCACAGAAAGTAGGTTCCTGCAATGATCGTGGCTTTGAATATTCCGGTGAGAGTAGGAAGAGATCCTCGCCGGAGACAACCAAGGATCGGAGAGGCTGCTACAAACGAAGAAGGAATGCTCAGGTTTGGACCACAGTCTCCTCCAAACCCGATGATAGATATGCATGGAGAAAGTACGGACAGAAAGAAATCCTTAATTCTAAATTTCCCagGAGTTACTTCAGATGCACTCGCAAGCATGATCAAGGTTGCCGGGCACTCAAACAGGTGCAACGGATTCAAGAGAGTCCAGAAATGTACCAGGCAACATACATTGGCATCCACACATGCAGAAACACGGTCAAGGCTCAACAGCTAGTCCTAGGTTCCTCCCCAGATCATTGGGAATCATTTCTGGTGAATCAACCTGAGCCAGACCCATCAAAGGTAACATATGAAGAAGATCAGAACCCTTTTAGCtcattaactccaataataaaagaagaaacaattcCAATAATAAAAGAGGAATATCCCAAAGAAGAAACACCGAGTGATGTTACAGACAACATGGACCCTAGTATATGGTCGGAGTTGAAGGATATTGAACCAGCAGTGATGCCCTCATCAAAGATGGCTTCGGATAATCACAGTCACAGTACTGATATGGAAATGGACTTTAGTGTAGATTCTGTTTTTGGCACCGATCGTGATCGTTTCCACTTTGATGATAAccagtttattta 971 0.4346 MGIPDPENVMTVKRVIRELVQGQESATQLKGLVQKQSGVDGSLSAEELVAKILRSFTESLSVLTATGVEVSQNFPAVSGENGSQKVGSCNDRGFEYSGESRKRSSPETTKDRRGCYKRRRNAQVWTTVSSKPDDRYAWRKYGQKEILNSKFPRSYFRCTRKHDQGCRALKQVQRIQESPEMYQATYIGIHTCRNTVKAQQLVLGSSPDHWESFLVNQPEPDPSKVTYEEDQNPFSSLTPIIKEETIPIIKEEYPKEETPSDVTDNMDPSIWSELKDIEPAVMPSSKMASDNHSHSTDMEMDFSVDSVFGTDRDRFHFDDNQFI 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01824 323 SUPERFAMILY WRKY DNA-binding domain 130 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g01824 323 MobiDBLite consensus disorder prediction 76 113 - -
Bva12g01824 323 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01824 323 MobiDBLite consensus disorder prediction 95 113 - -
Bva12g01824 323 PANTHER WRKY DNA-BINDING TRANSCRIPTION FACTOR 70 9 298 - -
Bva12g01824 323 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 298 IPR044810 GO:0003700
Bva12g01824 323 Pfam WRKY DNA -binding domain 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01824 323 MobiDBLite consensus disorder prediction 76 90 - -
Bva12g01824 323 Gene3D WRKY domain 119 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g01824 323 ProSiteProfiles WRKY domain profile. 133 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01824 Bva-Chr12 14871917 14874302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01824 14 233 WRKY Transcription Factor Family AT3G56400 44.395 6.10e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva12g01824 WRKY 1.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01824 - - gmx:100170683 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01824 12 14871917 14874302 Bva12g01451 12 12549014 12551146 ECH
Bva12g01824 12 14871917 14874302 Bva12g01824 12 14871917 14874302 ECH