Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01823 ATGGCAAACGAGACAAAGCAGAAAAACACAACAACTATGGAAGAGATCATTCATGGTATCGTTCATGGTTGTCAATTAGTTAGACAACTTGAACCAAACCTATTCAACTTGTTCAACCAGCCAGATATGCTGTCCGTGTCCATTGATGAGATAGTGAAGACCTTCGCTGCTGCTAAAGAGAGGCTACCATCAATGTCTCATCAAGATCAAGCTTCGTCCTTCTCTCCAATGTTACCTCGTGAAGCTTTCAAAGAGGAGCCGCCGCAACAGCAGCAGACTCAAATGGGTGCAACCATTTTCATGCAGGAATGGCTGAGGTCTGTGGATCCTTTGATCCAATTGCAGCAAGTTCAAGCCCCAATTGGGAGTGCGACACCGTTGGATATGCGGAGTTATCTGGAAAGTAAGACGGGAATGGAAATTCAGAAGCTGAGATCACAGCTTCAGATTGGTGAAATGGGAGGGAAAGATGCTGAAGGTTCTGAAAGATCAAAGGGCACAGAAGGAGATCAGGTTCAGCCAGCGGAAGCATCATCGTCGCGGCTGCGAAGAAGCAGGAAAGATGAGGATGAGAAAAAAACACTTGTGCTTCCAGCAAACCAGTTTGGAAACACAGATGTTCCACCGGAAGATGGCTTCACTTGGAGAAAATATGGCCAGAAAGAGATACTTGGATCCATGTACCCCAGGAGTTACTATCGGTGCACCCACCAGAAATTGTATGCCTGCCCAGCTAAGAAGCAGGTCCAGCGAGTTGATGACAAGCCTAACTTTTTTGCCGTAACATATAGAGGCAGCCACACCTGCCACATGTCATCCACAGCACCATCGTCATCAGTTCCCCCACAAATACTATTGGATATCTCACGGGAAATGACCCAAACTATATCCCCACAACTGTCTCCATCATCAACTTCAGGTTCACGGTGGCTGCAGTCCTCCATGCACCTCAGCCTCCACGGCAGCGGCGGCGTTGGTGGTGGCGGGGATGATCGGGCGGCCGGCCCTTCCACTTCTTCTCGATATGGTAAGGATAGAGAAATTGATTATGGAGTAGCTGACATGGCTGATGCCATGTTTAATTCTGGTAGTAGCAGCGGTAACAGTATGGAATCTCTGTTTGCTCCCGCCGAAGAATGGGAAACAGGCGAGAAGAAAAGCTCATG 1166 0.482 MANETKQKNTTTMEEIIHGIVHGCQLVRQLEPNLFNLFNQPDMLSVSIDEIVKTFAAAKERLPSMSHQDQASSFSPMLPREAFKEEPPQQQQTQMGATIFMQEWLRSVDPLIQLQQVQAPIGSATPLDMRSYLESKTGMEIQKLRSQLQIGEMGGKDAEGSERSKGTEGDQVQPAEASSSRLRRSRKDEDEKKTLVLPANQFGNTDVPPEDGFTWRKYGQKEILGSMYPRSYYRCTHQKLYACPAKKQVQRVDDKPNFFAVTYRGSHTCHMSSTAPSSSVPPQILLDISREMTQTISPQLSPSSTSGSRWLQSSMHLSLHGSGGVGGGGDDRAAGPSTSSRYGKDREIDYGVADMADAMFNSGSSSGNSMESLFAPAEEWETGEKKSS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01823 388 MobiDBLite consensus disorder prediction 319 346 - -
Bva12g01823 388 Gene3D WRKY domain 199 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g01823 388 ProSiteProfiles WRKY domain profile. 210 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01823 388 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 319 IPR044810 GO:0003700
Bva12g01823 388 MobiDBLite consensus disorder prediction 180 195 - -
Bva12g01823 388 SUPERFAMILY WRKY DNA-binding domain 207 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva12g01823 388 Pfam WRKY DNA -binding domain 210 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva12g01823 388 PANTHER WRKY TRANSCRIPTION FACTOR 55 13 319 - -
Bva12g01823 388 MobiDBLite consensus disorder prediction 149 213 - -
Bva12g01823 388 MobiDBLite consensus disorder prediction 359 388 - -
Bva12g01823 388 SMART WRKY_cls 209 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01823 Bva-Chr12 14867350 14869676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01823 7 374 WRKY Transcription Factor Family AT2G40740 36.096 3.63e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva12g01823 WRKY 5.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01823 - - gmx:100792150 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01823 12 14867350 14869676 Bva12g01823 12 14867350 14869676 ECH