Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01819 ATGGCTTCTGGGTCTGcagcttcttcttcctcttcttgttCAAATTGGGTCATGGAAAACGGAGATGTCCCTCATGTTTTGGCTGTTGATGACAACCTTATTGATCGCAAACTTATTGAGAAGCTACTCCGGAATTCTTCTTGCAGAGTGACAACTGCAGAAAATGGGCCACGGGCATTGGAGTTTTTGGGCTTAGCTAGTGATAAACAAAACAACCTGGGCACTGGTTCCAAAGTAAATTTGGTTATCACAGATTACTGCATGCCGGGGATGACAGGCTATGAGCtgcttaagaaaataaagGAATCAGCTATCACGAAAGAGGTTCCAGTTGTGATTATGTCATCAGAGAATATCCCAACTCGAGTGAACGAGTGTATGGAGAAAGGAGCTCAGATGTTCATTCAGAAACCCCTCAAACAATCTGATGTAAAAAAACTGACATGTCAGTTGATGAACTGCAAAGGCTA 470 0.3979 MASGSAASSSSSCSNWVMENGDVPHVLAVDDNLIDRKLIEKLLRNSSCRVTTAENGPRALEFLGLASDKQNNLGTGSKVNLVITDYCMPGMTGYELLKKIKESAITKEVPVVIMSSENIPTRVNECMEKGAQMFIQKPLKQSDVKKLTCQLMNCKG 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01819 156 SMART REC_2 24 148 IPR001789 GO:0000160
Bva12g01819 156 Pfam Response regulator receiver domain 26 146 IPR001789 GO:0000160
Bva12g01819 156 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR17-LIKE 13 154 - -
Bva12g01819 156 CDD REC_typeA_ARR 26 147 - -
Bva12g01819 156 Gene3D - 22 155 - -
Bva12g01819 156 SUPERFAMILY CheY-like 24 152 IPR011006 -
Bva12g01819 156 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 154 IPR045279 GO:0009736
Bva12g01819 156 ProSiteProfiles Response regulatory domain profile. 25 152 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01819 Bva-Chr12 14852264 14853563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01819 7 155 Response Regulator Gene Family AT3G56380 65.563 5.14e-65 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva12g01819 Response_reg 2.6e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01819 K14492 - gmx:100499827 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01819 12 14852264 14853563 Bva12g01819 12 14852264 14853563 ECH