Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01811 ATGTCGTTTCCCTCTAGAGGCTTCTCTCACCGGCGAGCTCGATCCGAGGTGCAATTCCGGATCCCCGATGACTTCGATCTGGATTTAGGTCCATTGGATACTCCTTCCGCCAATTTTGAAGATCTAGGATCAGAGGATGATCTCTTATGCGCGTACATGGATTTAGACAAATCCGGATCCAATTCCAAACCAGGATCATCAGCTCCGAAACCTGATACTGGCAATGCTGGTCCGTTGGATAGAAGTGGTGATGATGGGCACATCGAGAGTAGTGGTGAGAGTGAGAAAAAGGGGAGACCCAGGCATCGGTATAGCAATTCAGTTGATGGGTCCGTATTGGAGAGCATTGACGCCAAGAAGGCTATGCCACCTGATAAGCTAGCTGAGTTATGGACCATTGATCCCAAGCGAGCAAAGAGGATTCAGGCAAATCGCCAATCTGCGGCACGttcaaaagaaaggaaagctcGTTATGTATTAGAACTTGagagaaaaattcaaacactTCAAACTGAAGCGACTACTCTTTCGGCTCAATTAAGTCTTTTCCAGaGAGATACGACTGGTTTGAGTACGGAAAATACAGAGCTTAAGCTTCGGCTACAAGCTATGGAACAACAAGCTAAGTTACGTGATGcTCTAAATGAAGCACTGAAGCAAGAAGTTGATAGGCTGAAGATTGCTACAGGAGAGACAGTAACACCAACTGATAACTATGGTTTGGGAATGCATCCAATTCCATATTCCCAAGCTTCCTTCTTCTCACATCAGCCACAACAAAGGCCAAGTGAACCTCACGCCATAAGAATGCAGCAGTTACATTCACTCGGATCTAATATTTCAGCTCCCCATCAGCATCTGGTTGCCACAGCCCACCCACATAACTTGTCAGAAATGTTGTCTCAGGACTCCACTGGCCAATTTCAAGGGCTTGAGATAAGTAGCAGGGGTTCTAATCTTCGGATGCCTGACGGTACCCCCCTTTCTGCTAATGGAATCAGCAGTGCCTTTTG 1013 0.4511 MSFPSRGFSHRRARSEVQFRIPDDFDLDLGPLDTPSANFEDLGSEDDLLCAYMDLDKSGSNSKPGSSAPKPDTGNAGPLDRSGDDGHIESSGESEKKGRPRHRYSNSVDGSVLESIDAKKAMPPDKLAELWTIDPKRAKRIQANRQSAARSKERKARYVLELERKIQTLQTEATTLSAQLSLFQRDTTGLSTENTELKLRLQAMEQQAKLRDALNEALKQEVDRLKIATGETVTPTDNYGLGMHPIPYSQASFFSHQPQQRPSEPHAIRMQQLHSLGSNISAPHQHLVATAHPHNLSEMLSQDSTGQFQGLEISSRGSNLRMPDGTPLSANGISSAF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01811 337 MobiDBLite consensus disorder prediction 315 337 - -
Bva12g01811 337 MobiDBLite consensus disorder prediction 55 110 - -
Bva12g01811 337 CDD bZIP_plant_RF2 137 186 IPR044759 GO:0003700|GO:0006355
Bva12g01811 337 SUPERFAMILY Leucine zipper domain 136 187 IPR046347 GO:0003700|GO:0006355
Bva12g01811 337 MobiDBLite consensus disorder prediction 82 104 - -
Bva12g01811 337 PANTHER BZIP TRANSCRIPTION FACTOR 18 5 331 - -
Bva12g01811 337 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 5 331 - -
Bva12g01811 337 Coils Coil 200 221 - -
Bva12g01811 337 SMART brlzneu 132 196 IPR004827 GO:0003700|GO:0006355
Bva12g01811 337 Gene3D - 135 188 - -
Bva12g01811 337 MobiDBLite consensus disorder prediction 9 27 - -
Bva12g01811 337 MobiDBLite consensus disorder prediction 1 41 - -
Bva12g01811 337 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 134 197 IPR004827 GO:0003700|GO:0006355
Bva12g01811 337 Coils Coil 152 179 - -
Bva12g01811 337 Pfam bZIP transcription factor 136 188 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01811 Bva-Chr12 14807536 14811004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01811 4 320 bZIP Transcription Factor Family AT2G40620 56.342 4.00e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva12g01811 bZIP_1 2.7e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01811 - - zju:107414005 406.371