Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01800 ATGACTTTCAAGAGGAGGAATGGAGGGCGCAACAAGCATGGCCGTGGCCACGTCAAGTTTATTCGCTGCTCCAACTGCGGAAAATGCTGTCCTAAGGACAAGTCAATTAAGAGATTTCTTGTGAGGAACATTGTGGAGCAAGCTGCTGTGAGAGATGTTCAGGAAGCCTGTGTATATGAGCAGTACACTCTTCCCAAGCTGTATGTGAAGATGCAGTACTGTGTGTCCTGTGCTATTCACTCTCATGTTGTCAGGGTGCGATCTCGCACTGATAGGAGGAAGCGGGACCCACCACAACGCTTCATGAGGCGCAGGGATGATCTGCCAAGGCCTGGTCAACCTGGTCAAGCACCTCGCCCTGCCGGAACAGGAGCTCCAGCCCGCACTTA 389 0.5244 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFMRRRDDLPRPGQPGQAPRPAGTGAPART 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01800 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 IPR000892 GO:0003735|GO:0005840|GO:0006412
Bva12g01800 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Bva12g01800 129 Pfam Ribosomal protein S26e 1 105 IPR000892 GO:0003735|GO:0005840|GO:0006412
Bva12g01800 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 - -
Bva12g01800 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Bva12g01800 129 MobiDBLite consensus disorder prediction 90 110 - -
Bva12g01800 129 MobiDBLite consensus disorder prediction 85 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01800 Bva-Chr12 14761748 14763805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01800 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.621 2.09e-69 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01800 K02976 - gmx:100781822 211.46