Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01794 atggagaaaaaggGGAATATATTGATGCAAAAGTATGAGTTTGGTAGGCTATTAGGCCAAGGTAATTTCGCCAAAGTTTATCATGCAAGGGATCTTAGAACTGGTGACAATGTTGCAATTAAGGTGATTGACAAGGAGAAAGTTCTAAAAATTGGGTTGATTGATCAAACGAAGCGAGAAATATCTATTATGAGACTGGTTAAACACCCAAATGTAATGGAGCTTTATGAGGTCTTGGCCACCAAAACCAAGATTTACTTCATCATGGAGTATGCCAAAGGTGGTGAACTTTTCAACAAGGTAGCTAAAGGTCGACTCAATGAAGACATGGCTAGGAAGTACTTTCAACAATTGATCTGTGCGGTCGATTTCTGCCATAGCAGGGGTGTTTATCACAGGGATTTGAAGCCTGAGAATATACTATTGGATGAGAATGGAACTCTCAAGGTTACAGATTTTGGGTTAAGTGCCCTTGTTGAATCTCATCGTGAAGGCAACTTACTGAATACAACTTGTGGAACTCCTGCATATGTAGCTCCGGAAGTTATTAGTAGAAAAGCCTATGATGGAGCAAAGGCTGATATATGGTCTTGTGGAGTGATCCTATATGTTCTCTTGGCTGGTCATTTGCCATTCTATGATATGAATCTTATGGCAATGTATAGGAAAATTGCCAAAGCAAACTACAAATGTCCGAACTGGTTTTCATTTGAAGTGCGCAGACTACTAGCAAGGATCCTTGACCCCAATCCAAATACCAGGATTTCCTTATCAAGAATCATGGAAAATTCCTGGTTCAGAAAAGGACTCAGTAAAGCTGATAAATTGAAAGCAGAAGTAACAGATGCAGCTTTTCCTAACGCTGATGCAATATTTGGTCCATGTGAGAATAGTACTAGTGCTGAAGCAAATCAAGAATCAAGCAAAGTTACTAATTTGAATGCTTTTGATATAATCTCTCTATCAGCAGGCTTTGACTTGTCAGGCCTTTTTGCAACAAGTGATGAAAAGGATGACTTAAAATTTACATCCACGTGCTCTGCCTCATCCATCATGGCGAAATTGGAGGATATTGCTCACATTCTCGGGATGAAGATTAGTAAAAAGGATGGGGGTCTGCTGAAATTGGAAACTTCCAGGGAAGGTAGAAGGGGACCACTCTCTATTGATGCTCAGATATTTGAGTTCACTCCATCTTTTTACTTGGTTGAGATGAAGAAGTCCAGCGGGGATACACTGGAGTACCACAAGAAATTGGAAGATATACGACCAGCTCTCAAAGATATTGTCTGGGCTTGGCAAGGTGAGCAGCAATTGCTGCAGTG 1325 0.4 MEKKGNILMQKYEFGRLLGQGNFAKVYHARDLRTGDNVAIKVIDKEKVLKIGLIDQTKREISIMRLVKHPNVMELYEVLATKTKIYFIMEYAKGGELFNKVAKGRLNEDMARKYFQQLICAVDFCHSRGVYHRDLKPENILLDENGTLKVTDFGLSALVESHREGNLLNTTCGTPAYVAPEVISRKAYDGAKADIWSCGVILYVLLAGHLPFYDMNLMAMYRKIAKANYKCPNWFSFEVRRLLARILDPNPNTRISLSRIMENSWFRKGLSKADKLKAEVTDAAFPNADAIFGPCENSTSAEANQESSKVTNLNAFDIISLSAGFDLSGLFATSDEKDDLKFTSTCSASSIMAKLEDIAHILGMKISKKDGGLLKLETSREGRRGPLSIDAQIFEFTPSFYLVEMKKSSGDTLEYHKKLEDIRPALKDIVWAWQGEQQLLQ 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01794 441 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01794 441 PANTHER - 2 438 - -
Bva12g01794 441 CDD CIPK_C 314 427 - -
Bva12g01794 441 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Bva12g01794 441 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Bva12g01794 441 Gene3D Kinase associated domain 1, KA1 308 432 - -
Bva12g01794 441 SUPERFAMILY Protein kinase-like (PK-like) 8 276 IPR011009 -
Bva12g01794 441 Pfam NAF domain 311 368 IPR004041 GO:0007165
Bva12g01794 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bva12g01794 441 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Bva12g01794 441 Gene3D Transferase(Phosphotransferase) domain 1 92 288 - -
Bva12g01794 441 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01794 441 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01794 441 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01794 Bva-Chr12 14737258 14739492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01794 1 440 CBL-interacting serine-threonine protein kinases AT5G58380 61.404 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva12g01794 Pkinase 9.4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01794 K07198 - gmx:100801834 684.871