Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01790 ATGGCTGCTACAGCTGGGCATTCCTCCTTGTCGAACGGAGGGGATGGTGTTATTCGCTTCCCCTTGTCTCCTACGAGCGCTTTGGTCATTCAAAAGGGTGACATCACCAGGTGGTCCGTCGATGGTTCCTCCTCGGCAATAGTAAATCCCGCAAATGAGCGAATGCTTGGAGGTGGTGGTGCTGATGGAGCCATACACAGGGCTGCCGGCCCCGATCTTCTACAAGCATGCTACAGTGTTCCAGAAGTCGGACCTGGAGTTCGCTGCCCAACAGGAGAAGCAAGGATCACACCAGGCTTTAGACTCCCGGCTTCTCATGTTATTCATACTGTTGGACCAATCTACAATTCTGATAGTAACCCTGCTGCCTCTCTTGCAAGTGCTTACAGGAATAGTTTGAGGGTTGCAAAAGACAATAACATTCAGTATATAGCATTTCCAGCTATATCTTGTGGTGTCTTTGGGTATCCTTATGATGAGGCTGCCACGGTGGCTATTTCTACCATCAGGGAGTTCCGAAATGACTTTAAAGAGATCCACTTTGTTCTGTTCTTGCCTGATATTTATGATGCTTGGTTAAATAAGGCGAATGAATTTCTGAATAATTA 608 0.472 MAATAGHSSLSNGGDGVIRFPLSPTSALVIQKGDITRWSVDGSSSAIVNPANERMLGGGGADGAIHRAAGPDLLQACYSVPEVGPGVRCPTGEARITPGFRLPASHVIHTVGPIYNSDSNPAASLASAYRNSLRVAKDNNIQYIAFPAISCGVFGYPYDEAATVAISTIREFRNDFKEIHFVLFLPDIYDAWLNKANEFLNN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01790 202 Pfam Macro domain 48 165 IPR002589 -
Bva12g01790 202 ProSiteProfiles Macro domain profile. 15 200 IPR002589 -
Bva12g01790 202 SMART YBR022w_8 27 165 IPR002589 -
Bva12g01790 202 CDD Macro_OAADPr_deacetylase 28 197 - -
Bva12g01790 202 PANTHER MACRO DOMAIN-CONTAINING PROTEIN VPA0103-LIKE ISOFORM X1 14 201 - -
Bva12g01790 202 SUPERFAMILY Macro domain-like 27 198 IPR043472 -
Bva12g01790 202 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 14 201 - -
Bva12g01790 202 Gene3D Leucine Aminopeptidase, subunit E, domain 1 20 202 IPR043472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01790 Bva-Chr12 14717493 14719586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01790 33 138 C2H2 Transcription Factor Family AT5G01310 32.787 1.06e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01790 K23518 - qsu:111985090 336.65