Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01781 ATGGACTGCTCTGTGTGTACAACGATGCCATTAATATTAAGGCCTCCAAGGAATACAATATGTGGGGCTTGTTATGAAGCAGCTAGGAGCATAATCAATATGATGAACAAGCTTGAAACACAGaaagcaattgataattctaatGGTTCTCCAGCTTCACCTGCAAATTCCTGTAAGAATGGAGTCACACTTTCGGATGCTAAAAGATGGTGCTCAGAACAGAAAGATATGGTGCTTCAGCAGATAGAAGATATGGCCTTCTTGAGAAGCTTTGTTGATGCATACAAACAACAAATTCACACTGATATACTTGTCATACCTGGCGACTCCGCCTCTCCAATACCAGCTCATAAGGCTATCTTGGCGACAAGGTCAGAGATTTTCAAGAACATGCTAGACTTCGATGAATGCAAAGCGGCACCTAATAACACCATAGTATTACCGGAGTTGAAGTACAAGGAACTGGAGTCTCTGTTGGAGTTTCTATATAGTGGGACATTGGCTCCAGAAAAATTGGAGAAGCATGTCTACGCCTTGATACTGGCAGCTGACAAGTATGAAATCTCACACTTGCAGAAGCATTGCGAACGATACCTGCTGAATTCATTGAGTGCCTCAAATGCCCTTGACATCTTAGAGATTGCAGAAACTTGTTCAAACCAGCAATTGATGGAAAccacttttaatttcttagttgAAAATATAAGGGATATAGTCTGCTCCTCTAGGTTTGAAGAATTTGCCCGCAAGTGCCCGCATCTAAATGTGCAACTTATAAGGGCATCACTCAACTCTTCAAAATG 803 0.401 MDCSVCTTMPLILRPPRNTICGACYEAARSIINMMNKLETQKAIDNSNGSPASPANSCKNGVTLSDAKRWCSEQKDMVLQQIEDMAFLRSFVDAYKQQIHTDILVIPGDSASPIPAHKAILATRSEIFKNMLDFDECKAAPNNTIVLPELKYKELESLLEFLYSGTLAPEKLEKHVYALILAADKYEISHLQKHCERYLLNSLSASNALDILEIAETCSNQQLMETTFNFLVENIRDIVCSSRFEEFARKCPHLNVQLIRASLNSSK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01781 267 SMART BTB_4 101 203 IPR000210 GO:0005515
Bva12g01781 267 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 266 - -
Bva12g01781 267 Pfam BTB/POZ domain 96 202 IPR000210 GO:0005515
Bva12g01781 267 ProSiteProfiles BTB domain profile. 101 171 IPR000210 GO:0005515
Bva12g01781 267 Gene3D - 202 267 - -
Bva12g01781 267 SUPERFAMILY POZ domain 87 201 IPR011333 -
Bva12g01781 267 Gene3D Potassium Channel Kv1.1; Chain A 69 199 IPR011333 -
Bva12g01781 267 CDD BACK 204 246 - -
Bva12g01781 267 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 266 IPR044784 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01781 Bva-Chr12 14662490 14664545 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva12g01781 BTB 1.6e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01781 K10523 - gmx:100777561 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01781 12 14662490 14664545 Bva12g01781 12 14662490 14664545 ECH