Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01776 ATGTCGCCGGCGGCCGGATTAGACGTCCCTCTCTTGCCGGGTTCCAAATCGGCAGAAAAGGCTGCTTCTGTCTCTGGCGCCATATTCAATGTCGCGACGACCATAATTGGCGCGGGGATTATGTCGATTCCGGCGACTATAAAGGTTCTAGGAGTCATTCCGGCTATCCTGATGATAATGATCATCGGCATGCTGGCGGAAGTATCAGTAGACTTCCTGATGAGGTTTACGCATTCCGGCGAGACGACGACGTATGCTGGTATAATGAGGGAGTCGTTTGGCCCTGTAGGAGCTGTGGTCACACAAGTTTGTGTCATAATCACTAACCTAGGATGTTTGATTATGTACCAAATCATCATCGGAGATGTGCTCTCTGGGAATCAACCTGAAGGTGAAGCACACTTGGGCATTTTGCAGCAGTGGTTTGGTTTTCACTGGTGGACTTCCCGTGAATTTGCTATGCTTTTCACGTTGGTCTTCATTATGCTGCCATTGGCCTTGTATAGGCGTGTAGAATCCTTGAAATTCAGTTCTGCAATATCAACCCTCCTAGCAGTGGCATTTGTTGGCATATGTTCTGGCCTGGCAATCACTGCTATTGCCCAAGGAAAAACACACACTCCAAGATTGCTTCCTCAGTTGGACCACCGGACTTCCTTCTTTGATCTATTTACTGCTGTTCCAGTCATAGTCACAGCCTTTACGTTTCATTTTAATGTGCATCCAATTGGGTTTGAGCTTGCAAAGCCTTCTGATATGGCTTTTGCAGTTCGAATAGCGCTCCTACTAGCTGCTGCCATCTACTTTGCCATAGGCATATTTGGGTACCTTTTGTTTGGGGACACAATCCAGTCGGACatactaataaattttgatcagAATACTGCTTCTGCAGCTGGttctttgttaaataatttagttcGATTAAGCTATGCATTCCATATCATGCTCGTGTTCCCTCTCTTGAACTTCTCTTTGAGAGCCAACATAGATGAACTCCTTTTCCCAAACAAGCCTCTGCCAGCCAAGGACACCAAAAGATTTGTGACCCTCACCCTTGTGCTACTAGTCTTCAGCTACCTTATTGCTATAGCACTGCCTGATATATGGTACTTCTTTCAGTTTCTGGGTTCAACATCTGCACTTTGCCTTGCCTTCATCTTCCCTGGTGCTATTGCTTTGAGGGATGCTCATGGCATATCAAAGAGAAAGGACAAAATCGTAGCACTCATAATGGTTGTACTGGCTGTGATAACAAGTGCCATTGCCATCTCCACTAACATATATAACTCTTTCGGCAGCAAgtcata 1310 0.4466 MSPAAGLDVPLLPGSKSAEKAASVSGAIFNVATTIIGAGIMSIPATIKVLGVIPAILMIMIIGMLAEVSVDFLMRFTHSGETTTYAGIMRESFGPVGAVVTQVCVIITNLGCLIMYQIIIGDVLSGNQPEGEAHLGILQQWFGFHWWTSREFAMLFTLVFIMLPLALYRRVESLKFSSAISTLLAVAFVGICSGLAITAIAQGKTHTPRLLPQLDHRTSFFDLFTAVPVIVTAFTFHFNVHPIGFELAKPSDMAFAVRIALLLAAAIYFAIGIFGYLLFGDTIQSDILINFDQNTASAAGSLLNNLVRLSYAFHIMLVFPLLNFSLRANIDELLFPNKPLPAKDTKRFVTLTLVLLVFSYLIAIALPDIWYFFQFLGSTSALCLAFIFPGAIALRDAHGISKRKDKIVALIMVVLAVITSAIAISTNIYNSFGSKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01776 436 PANTHER AMINO ACID TRANSPORTER 3 433 - -
Bva12g01776 436 Pfam Transmembrane amino acid transporter protein 22 424 IPR013057 -
Bva12g01776 436 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01776 Bva-Chr12 14636923 14639061 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01776 9 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.664 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01776 - - gmx:100815694 646.736