Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01755 ATGGTAATGGAGAGCAGAAATCTGACTCCCAACAGTTTTTACCAAAACCCTTTTCAGTTTTTTCAATTTGAGATGAGGAATGGAGCAGATTGGCACCGTATTTTGGATCagaataaagagaaatggAAGAATCATTCAAAAACCCATAACCCTCCTCATCATATCAGGTTCTTGATTAATCGGTTCCTCTCAGCTCTGTGTTTGTATTTTCTTCTGCTATTCCTATGTGTGAAGCCAGTTTTGTGTGAAGGTGAGCGTTGGGATGGAGTGGTTGTCACAGAATCTAATTTCTTAGCACTTCAAGCGTTCAAGCAAGAGTTGGTTGATCCCAAAGGCTTCTTGAAGAGCTGGAATGACAGTGGCTATGGAGCTTGTTCTGGTGGTTGGGTTGGGATCAAGTGTGCTCAGGGACAGGTTATTGTGATCCAGCTTCCATGGAAGGGGTTCCGGGGACATATCACAGAGAGGATTGGCCAACTTCAAGGGCTTCGAAAGTTAAGTCTTCATGATAATGAAATTGGTGGTTCAATCCCTTCAGCATTGGGGATTCTACCCAACCTAAGAGGGGTTCAGCTATTTAATAATAGGCTAACAGGGTCAATCCCTCCTTCATTGGGTTTCTGCCCATTGCTTCAGTCTTTAGACCTCAGTAACAATTTACTCTCGGGGAGAATCCCTGATAACCTTGGAAACTCTTCAAAGCTTTATTGGCTTAATCTCAGTTTCAATTCCTTCTCCGGTCCCATACCGGCTAGCCTCACTCGCTCTGTTTCTCTCACGTTCCTTTCTCTCCAACACAATAATCTCTCTGGTTCTATCCCAAACTCATGGGGTGGAGCTCTAAAAAGTAACTTCTTCAGGCTTCAAAATTTGATCCTTGATCATAACTTATTCTCTGGAAGCATTCCTGCTTCTTTTGGCAATCTAAGCCAACTCAGAGAGATTTCTCTTGGTTATAATCAGTTTAGTGGAGCTATACCAATTGAATTAGGGAGGCTTTCTATGCTTAAAACATtagatttttctaataatgCCTTGAACGGAAGCTTGCCTGCCACTCTCTCTAACATATCTTCACTGAGCTTGTTGAATGTAGAGAACAACCATCTTGACAACCAAATCCCAGAATCTCTAGGCAGATTTCACAACCTTTCTGTGTTAAACTTGAGCAAAAACCGATTTAATGGTCCAATTCCTGCGAGTATTGGAAACGTTTCTACTCTTACACGGCTTGATTTGTCACTGAATAATCTCAGTGGAGAAATTCCAAATTCCTTGGACAATTTACGTAGTCTTAGTTTTTTCAATGTCTCTTTCAATGACCTCTCTGGTCCTGTTCCCACTTTACTCTCCCAGAAATTTAATTCAAGCTCATTTATGGGAAACATTCAGTTATGTGGGTATAGTCCTTCAACTCCATGTCCTTCGCAAGAACCATCTCCATCTCCTTCTTCTCAAGTTTCAAAAGCCCATCATCATAGGAAACTGAGTACCAAAGACATAATTCTCATAGCAGCAGGAGTTCTCCTCGTAATTTTGGTGGTACTTTGTTGCATCCTGCTCTTCTGCTTGATTAGGAAAAGAGCAGCATCAAAATCACAGGATGGCCAGGCCACAGCAAGAGCTGCAGCTGCCAGAGCAGAAAAAGGGTTCCCTCCGGTCGCCGGCGGTGAAGTGGAAGCGGGTGGTGAGGTTGGAGGGAAGCTAGTGCATTTTGATGGGCCAATGGCTTTCACAGCCGATGATCTCTTGTGTGCAACAGCAGAGATAATGGGAAAGAGCACCTATGGAACAGTATATAAGGCCACCTTGGAGGATGGAAGTCAAGTTGCAGTGAAGAGATTGAGGGAGAAAATCACTAAATCCCAGAGAGAATTTGAATCAGAAGTTAGTTTTATAGGGAAAATTCGACACCCAAATCTTTTGGCATTGAGGGCCTATTACACAGGACCCAAGGGGGAGAAGCTTCTGGTTTTCGACTACATGCCTAAAGGAAGTCTTGCTGCTTTTCTACATTCAAGAGGGCCTGAAACAGTCATTGATTGGCCAACAAGGATGAAAATAGCCCAGGGCATGGCTCGTGGCTTGTTCTACCTTCATTCCAATGAGAACATTATACATGGGAACCTCACATCAAGCAATGTCCTTCTTGATGAGAATACAAATGCTAAAATTGCAGATTTTGGTCTTCCACGGCTGATGACAACTGCTGCTAGTTCTAACGTGATTGCTACTGCTGGAGCATTAGGCTACAGAGCACCTGAACTCTCCAAGCTCAAGAAAGCCAACACAAAAACTGATGTGTACAGCCTTGGCGTTATTTTGTTGGAACTCCTAACGGGGAAGTCGCCCAGTGAGCCTACGAACGGCATGGATTTGCCTCAGTGGGTTGCCTCCATTGTAAAAGAAGAGTGGACAAATGAGGTTTTCGATGTGGAGTTGATGAGAGATGCATCAACAATTGGCGACGAATTGCTCAACACATTGAAGCTGGCTCTGCATTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGCTCAACAAGTAATCCAGCagcttgaagaaattagaCCAGAGAGATCAGTTAGTTCTGGGGATGATTTTGCCATCCCCTCAACCAGCGATTA 2627 0.4309 MVMESRNLTPNSFYQNPFQFFQFEMRNGADWHRILDQNKEKWKNHSKTHNPPHHIRFLINRFLSALCLYFLLLFLCVKPVLCEGERWDGVVVTESNFLALQAFKQELVDPKGFLKSWNDSGYGACSGGWVGIKCAQGQVIVIQLPWKGFRGHITERIGQLQGLRKLSLHDNEIGGSIPSALGILPNLRGVQLFNNRLTGSIPPSLGFCPLLQSLDLSNNLLSGRIPDNLGNSSKLYWLNLSFNSFSGPIPASLTRSVSLTFLSLQHNNLSGSIPNSWGGALKSNFFRLQNLILDHNLFSGSIPASFGNLSQLREISLGYNQFSGAIPIELGRLSMLKTLDFSNNALNGSLPATLSNISSLSLLNVENNHLDNQIPESLGRFHNLSVLNLSKNRFNGPIPASIGNVSTLTRLDLSLNNLSGEIPNSLDNLRSLSFFNVSFNDLSGPVPTLLSQKFNSSSFMGNIQLCGYSPSTPCPSQEPSPSPSSQVSKAHHHRKLSTKDIILIAAGVLLVILVVLCCILLFCLIRKRAASKSQDGQATARAAAARAEKGFPPVAGGEVEAGGEVGGKLVHFDGPMAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKSQREFESEVSFIGKIRHPNLLALRAYYTGPKGEKLLVFDYMPKGSLAAFLHSRGPETVIDWPTRMKIAQGMARGLFYLHSNENIIHGNLTSSNVLLDENTNAKIADFGLPRLMTTAASSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKSPSEPTNGMDLPQWVASIVKEEWTNEVFDVELMRDASTIGDELLNTLKLALHCVDPSPSARPEAQQVIQQLEEIRPERSVSSGDDFAIPSTSD 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01755 875 Gene3D Transferase(Phosphotransferase) domain 1 663 868 - -
Bva12g01755 875 SUPERFAMILY Protein kinase-like (PK-like) 589 857 IPR011009 -
Bva12g01755 875 ProSiteProfiles Protein kinase domain profile. 585 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01755 875 CDD STKc_IRAK 591 856 - -
Bva12g01755 875 MobiDBLite consensus disorder prediction 471 491 - -
Bva12g01755 875 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 15 862 - -
Bva12g01755 875 Pfam Leucine rich repeat 383 442 IPR001611 GO:0005515
Bva12g01755 875 Pfam Protein tyrosine and serine/threonine kinase 588 853 IPR001245 GO:0004672|GO:0006468
Bva12g01755 875 Gene3D Ribonuclease Inhibitor 350 476 IPR032675 -
Bva12g01755 875 Gene3D Ribonuclease Inhibitor 252 349 IPR032675 -
Bva12g01755 875 Gene3D Ribonuclease Inhibitor 94 251 IPR032675 -
Bva12g01755 875 SUPERFAMILY L domain-like 133 469 - -
Bva12g01755 875 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 15 862 - -
Bva12g01755 875 Pfam Leucine rich repeat N-terminal domain 98 134 IPR013210 -
Bva12g01755 875 Gene3D Phosphorylase Kinase; domain 1 591 662 - -
Bva12g01755 875 MobiDBLite consensus disorder prediction 854 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01755 Bva-Chr12 14556881 14560122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01755 87 858 Receptor kinase-like Gene Family AT3G51740 66.452 0.0 997
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva12g01755 PK_Tyr_Ser-Thr 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01755 - - aprc:113851294 1247.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01755 12 14556881 14560122 Bva12g01398 12 12303387 12308701 ECH
Bva12g01755 12 14556881 14560122 Bva12g01755 12 14556881 14560122 ECH