Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01727 ATGAGAAGAATGGAAAGGAATTGGAAATTCAGTCCTTCCGGGAGAGTTGTGCAGTTTGTGGTGGTATGGTTATTGTTTCAGAGCTTCGGTTTGTGCTGGTCTTTGAATGATGAAGGTAAAGCTCTATTGAAGTTGAGGCAGAGAGTGGTGAGTGACCCTTTCGGTGCGTTGTCAGATTGGATTGATCATGGAGAGGTTGACCCATGTAATTGGTTTGGAGTTGAGTGCTCAGAAGGAAGAGTGGCGGTCTTGAATTTGAGAGATCTTTGCCTTGTTGGAACTCTGGCACCCGAGCTTGCAAACCTTGTTCACATAAAGTCAATTATTTTGCggaacaattctttttttggaattaTCCCAGAAGAATTTGTAGAGCTGAAAGAATTAGAGGTTTTAGATTTGGGATTCAACAATTTCAGTGGACCTGTACCAGCAGATCTTGGGAGTAATATCTCACTAGCAATCCTTTTGTTGGACAACAATGAGCTTCTCGGTGGATTATCTCCTGAAATTACTGAATTGAAAATGCTTTCTGAATTTCAAGTAGATGAAAACCAGTTAACAAATACAGCTAAAATGGCATCTTGCACCGGAAGATCCAGCAGAAGTCATGGTGGCCAAGATAAAGCAGTTCGGATACTACGTGATGATACTCTTAAGAGAACTGATATTCGTAACCGTGAAAATCCACCTCCTGAAGCCCCTTCTCCATCCCCTGTTACAGATCCTCCCTCCCCAAATGCAACAGCACCATTGCCACAGCCAGCTTCCCCTGGTCAAACTGCTCCAGCTCCTTCGCAGTCTACACCTGCCGCTAGTTCACAATCTAAGACTAAAAATACCTCAAGAGTCGCAGTTTTGGCTGGAGTTTTAGGCGGTGTGTTTCTTCTCATTTCAATCATTGTTGTATATCTCTGGAAAACCAATAAGGTAGCTACTGTCAAACCTTGGGCAACAGGATTAAGCGGACAACTTCAGAAGGCATTTGTGAATGGTGTGCCAAAGCTGAAGAGATCAGAGGTTGAAGCAGCTTGTGAAGATTTTAGTAATGTAATTAGTACTTCACCTGTCGGTACAGTGTACAAAGGGACTTTATCAAGTGGAGTTGAAATAGCTGTAGCTTCTATCACGGTAACATCATCCCAGAATTGGTCAAAGCATTTAGAAGCACAGTTTTTGAAGAAGATAGATGCATTATCAAAAGTGAACCACAAGAATTTTGTCAACCTGCTCGGGTATTGTGAAGAAGAGGAACCTTTCACCCGAATGGTGGTATTTGAGTATGCCCCTAACGGAACAGTCTTTGAGCATTTACACTTTAAAGAGGCTGAGCACTTAGATTGGGGAACAAGACTTAGAATTGCAATGGGCATGGCATACTGCCTCCAACATATGCACCAGCTTGACCCTCCTATAGTCCATAGCAATCTGAGTTCGCAGGCTGTTTGTCTTACAGATGACTATGCTGGCAAAGTCTCGGATTTTGGTATCTTGACTGAAATAGCTTTAGCTGAGACAAAAGCTGTGGCCAAAAGACAATCTGATGTGCCATCAGCAAGTCCAGCAAGTAATGTCTATAGCTTTGgtgttatattatttgaaatggTAACGGGTCGGCTCCCTTATTCAGTAGACAATAAAGGGTCACTTGAAGACTGGGCATCACATTATTTACAAGGGAGCCAGCAGCTCAAAGAGAAAGTGGATCCAACTCTTGAATCTTTCCAAGAAGAGCAGTTAGAACAAATTGATGAACTGATAAAATCTTGTGTTCACCCTGACCCAGAGCAGAGACCAACAATGAAAGAAGTGAGTCTGAGACTGAAAGAGATTACAGGTATAACAGCAGAGGGAGCAGTCCCCAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTTCTTCAGCAGATGCAAGCTG 1919 0.4221 MRRMERNWKFSPSGRVVQFVVVWLLFQSFGLCWSLNDEGKALLKLRQRVVSDPFGALSDWIDHGEVDPCNWFGVECSEGRVAVLNLRDLCLVGTLAPELANLVHIKSIILRNNSFFGIIPEEFVELKELEVLDLGFNNFSGPVPADLGSNISLAILLLDNNELLGGLSPEITELKMLSEFQVDENQLTNTAKMASCTGRSSRSHGGQDKAVRILRDDTLKRTDIRNRENPPPEAPSPSPVTDPPSPNATAPLPQPASPGQTAPAPSQSTPAASSQSKTKNTSRVAVLAGVLGGVFLLISIIVVYLWKTNKVATVKPWATGLSGQLQKAFVNGVPKLKRSEVEAACEDFSNVISTSPVGTVYKGTLSSGVEIAVASITVTSSQNWSKHLEAQFLKKIDALSKVNHKNFVNLLGYCEEEEPFTRMVVFEYAPNGTVFEHLHFKEAEHLDWGTRLRIAMGMAYCLQHMHQLDPPIVHSNLSSQAVCLTDDYAGKVSDFGILTEIALAETKAVAKRQSDVPSASPASNVYSFGVILFEMVTGRLPYSVDNKGSLEDWASHYLQGSQQLKEKVDPTLESFQEEQLEQIDELIKSCVHPDPEQRPTMKEVSLRLKEITGITAEGAVPKLSPLWWAELEISSADAS 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01727 639 PANTHER PROTEIN MALE DISCOVERER 2 4 639 - -
Bva12g01727 639 SUPERFAMILY Protein kinase-like (PK-like) 332 607 IPR011009 -
Bva12g01727 639 Gene3D Ribonuclease Inhibitor 34 206 IPR032675 -
Bva12g01727 639 MobiDBLite consensus disorder prediction 193 280 - -
Bva12g01727 639 MobiDBLite consensus disorder prediction 205 228 - -
Bva12g01727 639 Pfam Leucine rich repeat N-terminal domain 36 77 IPR013210 -
Bva12g01727 639 PANTHER BNAA09G55080D PROTEIN 4 639 - -
Bva12g01727 639 Gene3D Phosphorylase Kinase; domain 1 318 428 - -
Bva12g01727 639 ProSiteProfiles Protein kinase domain profile. 346 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01727 639 MobiDBLite consensus disorder prediction 230 260 - -
Bva12g01727 639 Pfam Protein tyrosine and serine/threonine kinase 351 605 IPR001245 GO:0004672|GO:0006468
Bva12g01727 639 SUPERFAMILY L domain-like 38 190 - -
Bva12g01727 639 MobiDBLite consensus disorder prediction 261 280 - -
Bva12g01727 639 Gene3D Transferase(Phosphotransferase) domain 1 429 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01727 Bva-Chr12 14428267 14432603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01727 35 614 Receptor kinase-like Gene Family AT5G16000 26.853 4.12e-52 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Bva12g01727 PK_Tyr_Ser-Thr 2.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01727 - - gmx:100807163 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01727 12 14428267 14432603 Bva12g01727 12 14428267 14432603 ECH