Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01719 ATGGCCCGCACGACTCCGAGTTCTAACCCGCACTCTGCCAATAGGGGCGGTGGCGGTGGCAGTGGCCGTGAGGACTGTTGGAGCGAGGGTGCTACCGAGATTTTGATCGAAGCATGGGGCAACCGTTATATCCAGCTCAACCGTGGTAACCTCCGTCAGAAGGACTGGAAGGAAGTCGCCAATACCGTCAACGCCCGTCAAGACGGCGTCAAGCCTCGCAAGACGGACATCCAATGTAAGAACCGGATCGATACGCTGAAGAAGAAGTACAAGGTGGAAAAGTCGAAGCCACCTCCGTCTAAATGGGTTTTCTACCACCGCCTTAAGTCTCTCATCGGCTCTCAGGTCGTTGCTGACAAGAGGCTAACCACCGTTACTTTAACCGTCAAATCGTCCAAGCCGAAACCCAACCCCAGTCCGATTTGGAGCTCCGCTCCTGCGCTCTATTCGGGTGGGTCTTCCAGGTTGGATTCGGGTGGTTGGACCATGGAGAGTTCACTGggtgatgaagatgaaaacGATGATATGGGGTTTGATGAGAGAGCAGTGAGTAAGCAAGGGTTTGAGACAGTGGATTTTTCTGAGGGAGCTGCATTCAGGGAATTGGCAAGGGCGATTCTCAAGTTTGGGGAGATTTATGAGAggatcgagagctccaagcaGCAGCAGATTATGGAATTGGAGAAGCAAAGAATGGAGTTTACTAAAGATCTCGAATTTCAAAGGATGAATATGTTCATGGATACTCAATTAGCGCTCGAAAGAACAAGGCGTCCAAAGTATGGCAATACCTCAGGGGCTAAGACATG 809 0.4883 MARTTPSSNPHSANRGGGGGSGREDCWSEGATEILIEAWGNRYIQLNRGNLRQKDWKEVANTVNARQDGVKPRKTDIQCKNRIDTLKKKYKVEKSKPPPSKWVFYHRLKSLIGSQVVADKRLTTVTLTVKSSKPKPNPSPIWSSAPALYSGGSSRLDSGGWTMESSLGDEDENDDMGFDERAVSKQGFETVDFSEGAAFRELARAILKFGEIYERIESSKQQQIMELEKQRMEFTKDLEFQRMNMFMDTQLALERTRRPKYGNTSGAKT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01719 269 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 11 266 - -
Bva12g01719 269 Coils Coil 224 244 - -
Bva12g01719 269 MobiDBLite consensus disorder prediction 1 25 - -
Bva12g01719 269 Pfam Myb/SANT-like DNA-binding domain 24 111 IPR044822 -
Bva12g01719 269 MobiDBLite consensus disorder prediction 1 15 - -
Bva12g01719 269 Gene3D - 27 92 - -
Bva12g01719 269 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 266 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01719 Bva-Chr12 14397282 14400076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01719 196 265 Trihelix Transcription Factor Family AT3G14180 49.315 1.91e-16 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva12g01719 Myb_DNA-bind_4 2.2e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01719 - - jre:108980016 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01719 12 14397282 14400076 Bva12g01371 12 12174632 12177332 ECH
Bva12g01719 12 14397282 14400076 Bva12g01719 12 14397282 14400076 ECH