Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01716 ATGGGAAGTTCTGTGCGTGTCAAAGAAGCTGTGGTGGTGACCCCTTCTGAGCCAACCCCTGCTCGTGTCCTCGCTCTCTCCGCTCTCGATTCCCAGCTCTTTCTTCGCTTCACTATAGAGTACCTCTGGGTCTACAAGCCCTGCCCCACTCTGGACCAGAGTGCCACCGTCGCTCGTTTGAGAGCAGCATTAGCCAAAGCTTTGGTTCCTTATTACCCATTTGCCGGCAGGGTCAGGGCTAGACCCGATGGTTCCTGCCTCGAGGTCCTCTGTCGAGCACAGGGTGCGGTTTTCATCGAGGCTTTTTCAGACCGTTACGCAAGCAACGACTTTGACAAAGCACCAAAAACTGTCACCCACTGGAGAAAATTCTTATCTCTCTACGTGTCTGACGTTCTCAAAGGATCACCACTGCTAGTGGTTCAGCTCACCTGGCTTAGAGACGGCGCCGCCGCACTTAGTGTTGGGATCAACCATTGTATTTGCGATGGTGCCGGCAGCGGCGAGTTCCTCAATTATTTCGCCGGGTTAGCTTCTGGCATCGATTTCAAACCCAAACCCATTTGGGATCGTCACCTTCTCAATCCACCACCCATGAAACACAATCGGGCTAACCCAACCGTCCTCCCCGAGTTCAATCGAGTCCCCGATCTCTGTGGGTTCATGACTCGGGTTTGCAGTGACCTCAGACCCACCTCCATTACCTTCGATAAACGACGCCTCAATGAGCTCAAGAATCTAGCCGGTTCGACGAGTCGACCCAGTGAGTTGTCATACTCATACACATCATTCGAGGTGCTCGCGGGTCACGTGTGGAGGAGCTGGGCAAGAGCATTGGGCTTCccttcaaatcaaattctGAAGCTGTTATTCAGCATCAACTTCCGGAACCGGGTCAAACCGCGGATACCCGACGGGTACTACGGGAATGCTTTCGTGCTGGGATGCGCCCAGACGAGCACGAAGGAGCTGACGGAGAAGGGTCTCGGGTACGCAGCGAGTTTGGTTAAGAGGGCGAAAGAGAGAGTGGACAGTGAGCACGTGGCAAGGGTGATCGAGTCGGTATCCGAGATGAGAGCGTGTCCTGACTCAGTGGGGGTTCTGATAATGTCGCAGTGGTCAAGGCTGGGCTTGGAAAGGGTTGACTTTGGGATGGGGAAGCCAGTCCAAGTGGGGCCCGTTTGCTGCGATAGATACTGTTTACTTTTGCCGGCGaaggaggagagagagagtgtgAAGGTGATGGTGGCAGTCCCTGCAGTTGCTGTTGACAGTTACCACCATCTGCTCACAGCATA 1298 0.5285 MGSSVRVKEAVVVTPSEPTPARVLALSALDSQLFLRFTIEYLWVYKPCPTLDQSATVARLRAALAKALVPYYPFAGRVRARPDGSCLEVLCRAQGAVFIEAFSDRYASNDFDKAPKTVTHWRKFLSLYVSDVLKGSPLLVVQLTWLRDGAAALSVGINHCICDGAGSGEFLNYFAGLASGIDFKPKPIWDRHLLNPPPMKHNRANPTVLPEFNRVPDLCGFMTRVCSDLRPTSITFDKRRLNELKNLAGSTSRPSELSYSYTSFEVLAGHVWRSWARALGFPSNQILKLLFSINFRNRVKPRIPDGYYGNAFVLGCAQTSTKELTEKGLGYAASLVKRAKERVDSEHVARVIESVSEMRACPDSVGVLIMSQWSRLGLERVDFGMGKPVQVGPVCCDRYCLLLPAKEERESVKVMVAVPAVAVDSYHHLLTA 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01716 432 Pfam Transferase family 4 423 - -
Bva12g01716 432 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 429 - -
Bva12g01716 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 429 - -
Bva12g01716 432 Gene3D - 224 428 IPR023213 -
Bva12g01716 432 Gene3D - 2 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01716 Bva-Chr12 14386496 14388117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01716 5 418 Monolignol Biosynthesis Gene Families AT5G48930 28.637 3.73e-47 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01716 - - gmx:100817048 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01716 12 14386496 14388117 Bva12g01716 12 14386496 14388117 ECH