Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01713 ATGGTAGGTGTGAGCTCTAAGAGTAGCGGCGGCGATCGGGTCAAAGGGTCCTGGAGTCCCCACGAGGACGCCACTTTGATAAAGCTGGTGGAGCAGCACGGGCCGCGCAATTGGTCTCTTATCAGCAGCGGCATCCCTGGCCGCTCCGGCAAGTCTTGCAGGCTCAGATGGTGCAATCAGCTCAGCCCCGACGTGCAGCATAGACCATTCACAGCCGCGGAGGATGCTATCATCATCCAGTCTCATGCCGTCCATGGCAACAAGTGGGCGACCATCGCACGCCTCCTGCCTGGACGTACGGATAATGCTATTAAAAACCACTGGAACTCCACGCTTCGTCGCGGGCGAGCGGCATCGGCGGGGGAGTTGTCATCGCCGTCTGAGTCCAACGAGTCCAACTCGATTTTTATAAGGAAGCGACCTGGTATCGGTGATCCCGGCGATGCTTCCGATCGGTCGGAATTCGGACAGTTATTGAAGCGGCGGCGAGTTTCATGTGAGAATAACAGTTCCAATGATCAAGATGACGAGAAGATGTTGAAGGAACCGGTGACATCACTGACATTGTCTCCTCCCGGAGAGAGCATGACATCGGAGGCGGCGGCCGAAGGCAACAAAGTTGAACAAGAGAATGAGAGAGAGGGGAAGGAGGAGACTTGCTTGCTGAGAATGATGCAGCGCATGATAGCAGCGGAGGTTAGGAATTACATTGATAACTTGCGCTCAGACGATAAGCAAGCACTTGGAATTGAGCTGGGCCTAGGCCAAGACCCAGCCCTTCAAAAGTA 788 0.5495 MVGVSSKSSGGDRVKGSWSPHEDATLIKLVEQHGPRNWSLISSGIPGRSGKSCRLRWCNQLSPDVQHRPFTAAEDAIIIQSHAVHGNKWATIARLLPGRTDNAIKNHWNSTLRRGRAASAGELSSPSESNESNSIFIRKRPGIGDPGDASDRSEFGQLLKRRRVSCENNSSNDQDDEKMLKEPVTSLTLSPPGESMTSEAAAEGNKVEQENEREGKEETCLLRMMQRMIAAEVRNYIDNLRSDDKQALGIELGLGQDPALQK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01713 262 CDD SANT 69 112 IPR001005 -
Bva12g01713 262 SMART sant 14 63 IPR001005 -
Bva12g01713 262 SMART sant 66 114 IPR001005 -
Bva12g01713 262 PANTHER MYB PROTEIN-RELATED 9 209 - -
Bva12g01713 262 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Bva12g01713 262 Pfam Myb-like DNA-binding domain 15 61 IPR001005 -
Bva12g01713 262 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Bva12g01713 262 Gene3D - 14 66 - -
Bva12g01713 262 Gene3D - 68 138 - -
Bva12g01713 262 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva12g01713 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bva12g01713 262 MobiDBLite consensus disorder prediction 154 182 - -
Bva12g01713 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 65 IPR017930 -
Bva12g01713 262 ProSiteProfiles Myb-like domain profile. 10 61 IPR001005 -
Bva12g01713 262 CDD SANT 17 59 IPR001005 -
Bva12g01713 262 MobiDBLite consensus disorder prediction 122 136 - -
Bva12g01713 262 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 9 209 - -
Bva12g01713 262 MobiDBLite consensus disorder prediction 115 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01713 Bva-Chr12 14367414 14369919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01713 12 114 MYB Transcription Factor Family AT2G23290 77.670 1.28e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva12g01713 Myb_DNA-binding 6.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01713 - - rcu:8265376 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01713 12 14367414 14369919 Bva12g01713 12 14367414 14369919 ECH