Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01712 ATGGTTTCTATTTTGGATATGGAAAGCTACTACTATTCTGGGTGGCCTCTAAGCACTAATTGGCCTCAATGCAACGCTGCAACAGGCAGTGACTCTCCTTTTTCAGTCCCAACACCAATTCTGCCTCATGTCTCTGACTCTAATTCTGCTCAATTCTATGAGTTTCCCCCTCCTTGGCCTTTACCAATTGAAGGGTCTGCAGAGGATCGAGCTGCAAGTGCTTCCAAGAGTCATAGCCAAGCAGAGAAGCGACGCAGGGACAGGATCAATGCACAACTTGCTACTCTCAGAAAGCTGATTCCCAAGTCTGATAAGATGGATAAGGCAGCCTTATTAGGGAGCGTGATAGATCATGTCAAAGATCTAAAGAGAAAAGCCATGGATATTGGCAAAGCCTTAACAGTTCCCTCTGAAATTGACGAAGTAACAATAGATTATGACCCTGCTCAAGATGAAACTTGCACTAAAATAAGCAAATTTAAAGACAAAATCATCATAAAGGCTTCTGTTTGCTGTGATGATAGACCAGAACTGTTCTCAGAACTCATTCAAGTGCTCAAAGGCTTGAGATTAACTGCAGTAAAAGCTGACATAGCAAGTGTTGGCGGCAGAATTAAAAGCATATTGGTGCTCTGCTCCAAGGATAATGAAGAGGGTGTTTGCCTAAGCACTCTTAAACAGTCCCTTAAATCAGCTGTGAGCAAAGTTGCTACTTCATCCATGGCATCGAGTTGTACCACTAGAAGTAAAAGGCAGAGGTTCTTCTTGCCTTCCCATTACATGCAGTA 788 0.4302 MVSILDMESYYYSGWPLSTNWPQCNAATGSDSPFSVPTPILPHVSDSNSAQFYEFPPPWPLPIEGSAEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVIDHVKDLKRKAMDIGKALTVPSEIDEVTIDYDPAQDETCTKISKFKDKIIIKASVCCDDRPELFSELIQVLKGLRLTAVKADIASVGGRIKSILVLCSKDNEEGVCLSTLKQSLKSAVSKVATSSMASSCTTRSKRQRFFLPSHYMQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01712 262 CDD bHLH_AtAIG1_like 68 147 - -
Bva12g01712 262 SMART finulus 79 128 IPR011598 GO:0046983
Bva12g01712 262 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 122 IPR011598 GO:0046983
Bva12g01712 262 PANTHER TRANSCRIPTION FACTOR BHLH51 40 261 - -
Bva12g01712 262 PANTHER TRANSCRIPTION FACTOR BHLH30 40 261 IPR045847 GO:0003700|GO:0006355
Bva12g01712 262 Gene3D - 67 129 IPR036638 GO:0046983
Bva12g01712 262 MobiDBLite consensus disorder prediction 64 87 - -
Bva12g01712 262 CDD ACT_UUR-ACR-like 169 204 - -
Bva12g01712 262 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 125 IPR036638 GO:0046983
Bva12g01712 262 Pfam Helix-loop-helix DNA-binding domain 76 122 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01712 Bva-Chr12 14364842 14365995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01712 30 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 42.798 6.37e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva12g01712 HLH 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01712 - - gmx:100799687 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01712 12 14364842 14365995 Bva12g01712 12 14364842 14365995 ECH