Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01700 ATGGCTGTCTCCGACGTCGAAGCAGTACTAGAATTCCTGAGGAAAAATGGGTTCTCGGAAGCAGAGTCTGCTTTCAAAGAGGACATCTTTGAAAAGGGTGATCTGGGATCCTTTGACTACGAGAAATTCTTCTTCCCAATGGTGCCACCGCCTCCACCCGTCAGAACCCGATCGAGTGCCCGGTTGCCGGATGCTCCCGCCGGCAGAGAGTGCTCCAAATCGAGCTCTGTGTCCTCCGACGATGAGTTTCAGAGCTTGAAGTCATCTACTTCTGCTTCAGAATTCATCAATCCATATGGAATACGTTCCTCATCTCAGACTCAAAATGATTCCGAATCTTCATCTGATAGATTATCTCAATTTGGAACTGCGCGTGATTACAATGATTTTGACATGCAAAATGAACCATACTGGTACAATGAGAAAGATGATGGCCAATTCATGACTCCTAGTTTTGAAGGGCCAGATTTCTTAGGCTGTCAAAGCGAGGATAAGTTTGTCATGACATCAGAAATGGAAAACCAGAACGAGAACTCTAAGGGTCTTGATTACGGCTATGAAGTGTTTAAACTAGAGGAAAATGATAATTGCATGGATAAAGCATGCCTTCTCAATCATTCCTCAGTAGATGATGAGAATGTGACTTATTTGAAAGAGTACAGTCACAAGGGTAAGAAAGACCAGCTTGAAGGAGGTTTAGAGGGAAAACCTGAGCTAAAAACTCTTGCCTATGGTTGTGAAGTCCCATTTTGGTGCAAATGCTATGCAGATTCAGGAGAGTCTTGTAGTGGGGATCCTGCAAACTACAGCTACCCTAGTTTGAAAGACATTCTCAGTGATTGTCATTTAAAGATGGTTGACGATGTTGCTTCTTATGATTCTGCTCCAAAGAATAATAACCAAACTTTTGACTACCCCACTGTCAATGGCTGCAGTAAGGATTTTAAAGGTTCCTATGACTTAACCCTCAAATATCCAGAGACGAACCTAACAAATGGACTTGATAGCTATGAATTTCGAGATGGAGATTTAACTGAAGAATGCCGAGAGCCAGAGATTACTGCAGATGGAGGGGATGATACTGATGACGAGCTTCTAAAGTATACTCAAGATGATGAATATGAAGTATTTGACCTAAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAGCAAGGAGATACCGATTGTGCTAAATACAGTCTTAGCTGGGAGATACTATATCACAGAATATCTTGGTTCGGCTGCCTTCAGTAAGGTTGTTCAGGCACGTGATCTTCACGCTGGAATAGATGTTTGCTTGAAGATTATCAAAAATGACAAAGACTTTTTGGATCAAAGCTTGGATGAAATCAAACTTCTTAAACTTGTCAATAAGCATGATCCAGCCGATGAGCGCCATTTATTGCGTCTTTATGACTACTTCTATCATCAGGAGCATCTGTTCATTGTTTCCGAGCTTCTGCGAgcaaatttatatgaatttcaGAAATTCAATCAGGAATCTGGTGGGGAACCATATTTTACATTGAGAAGGCTGCAGCTCATAACTCGCCAGTGTCTGGAGGCTCTGCAATACTTGCATGAGTTGGGAATCATTCACTGTGACCTGAAGCCGgaaaatattctaataaaaaactaCAAAAGATGTGAGATAAAGGTCATTGATCTAGGAAGCAGTTGCTTCCAGACAGACAGCTTGTGCCTATATGTACAATCACGATCCTATAGGGCTCCTGAAGTGATGCTGGGCCTGCAATATGATGAAAAGATTGACATATGGTCTATTGGCTGTATTTTAGCCGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGAGGCTGTTGCTATGATTCTGGCACGCATGGTTGGAATGCTTGGTGCTATTGATCTGGAGATGTTGGTGAAGGGGCAGGACACACACAAGTACTTCACCAaagaatatgatatttattatgtaaatgAGGATACAAATCAGCTGGAGTACATAATTCCTGAGGAATCATCGTTGGAACAGCATCTGCAAGTTGATGATGCAATGTTTATCGACTTTGTCAGATACTTGCTCAGCGTCAACCCCAAAAGACGGCCAACTGCAAGACGGGCACTGAAGCATCCATGGCTCTCCCGTGTTTATACGTG 2147 0.4155 MAVSDVEAVLEFLRKNGFSEAESAFKEDIFEKGDLGSFDYEKFFFPMVPPPPPVRTRSSARLPDAPAGRECSKSSSVSSDDEFQSLKSSTSASEFINPYGIRSSSQTQNDSESSSDRLSQFGTARDYNDFDMQNEPYWYNEKDDGQFMTPSFEGPDFLGCQSEDKFVMTSEMENQNENSKGLDYGYEVFKLEENDNCMDKACLLNHSSVDDENVTYLKEYSHKGKKDQLEGGLEGKPELKTLAYGCEVPFWCKCYADSGESCSGDPANYSYPSLKDILSDCHLKMVDDVASYDSAPKNNNQTFDYPTVNGCSKDFKGSYDLTLKYPETNLTNGLDSYEFRDGDLTEECREPEITADGGDDTDDELLKYTQDDEYEVFDLRIIHRKNRTGFEESKEIPIVLNTVLAGRYYITEYLGSAAFSKVVQARDLHAGIDVCLKIIKNDKDFLDQSLDEIKLLKLVNKHDPADERHLLRLYDYFYHQEHLFIVSELLRANLYEFQKFNQESGGEPYFTLRRLQLITRQCLEALQYLHELGIIHCDLKPENILIKNYKRCEIKVIDLGSSCFQTDSLCLYVQSRSYRAPEVMLGLQYDEKIDIWSIGCILAELCSGEVLFPNEAVAMILARMVGMLGAIDLEMLVKGQDTHKYFTKEYDIYYVNEDTNQLEYIIPEESSLEQHLQVDDAMFIDFVRYLLSVNPKRRPTARRALKHPWLSRVYT 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01700 715 PANTHER DUAL SPECIFICITY PROTEIN KINASE 4 714 - -
Bva12g01700 715 ProSiteProfiles Protein kinase domain profile. 408 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01700 715 MobiDBLite consensus disorder prediction 71 85 - -
Bva12g01700 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Bva12g01700 715 CDD PKc_DYRK_like 408 710 - -
Bva12g01700 715 Gene3D Phosphorylase Kinase; domain 1 403 489 - -
Bva12g01700 715 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 4 714 - -
Bva12g01700 715 SUPERFAMILY Protein kinase-like (PK-like) 397 713 IPR011009 -
Bva12g01700 715 Gene3D Transferase(Phosphotransferase) domain 1 462 710 - -
Bva12g01700 715 Pfam Protein kinase domain 410 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01700 715 MobiDBLite consensus disorder prediction 97 119 - -
Bva12g01700 715 MobiDBLite consensus disorder prediction 54 85 - -
Bva12g01700 715 SMART serkin_6 408 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01700 Bva-Chr12 14258440 14262022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01700 405 705 MAP Kinase Gene Family AT5G19010 31.447 1.41e-32 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Bva12g01700 Pkinase 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01700 - - gmx:100783988 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01700 12 14258440 14262022 Bva12g01700 12 14258440 14262022 ECH