Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01698 ATGAAGAAAGTACCCTCTCCCTTCGTCACAGTCCCCGTCAACGTTAGTCTCGCCGTCGCTGTAATTCTCTTCTCTCTAATTATCTCATCCCATGCTCTCGGCTCCGGTGCCACCCTCTCAATCAACGACGCCTCCGCCACCGTCTGCGGTATCGTAGCAGAGGAGCCAAGGCAGCGCATTGAATGTTATAGTCGCGAGGAGGTCATCCCCGTTGCTCCCAACATCTCATTCTCGTCCATTTCCGGCGGGAGGGACGATTTCTGTGGCCTTAGGTCCGGTAACTACAGTTTACTTTGCTGGAATACAGTCTCTGCCAATGACAGCTTTCAAAGCAAAAGGCTTTATTACAATGATACTGTTCCATTGGAGAATCTCGCACTCGGGGATAACCAAATTTGCGCGACGATCGTGGGTTCTGGGAATCTTAGATGTTGGAGAACTAATAACACCTTTGAATGGTCCGAGTCTGATCAATTTACGTCTATAACATCTGGGTCTGGTTTTTCTTGCGGAATTTTGAGGAATAGTTCTCAGGTTCGGTGTTGGGGGAACAGGTTCATTGCGAATCAGATAGAGGATGAGTTTAGAAACATGACCATGGCGACTCTGGTAGCTGGTGATTCCCACGTTTGTGGATTGAATCAAACCGGGTTTTTGTTATGCAAAGGGAGTAACAGTTCTGAGCAACTCAATGTTCCTCAGGGAGAGTCTCCGCAGTATACTGGTTTGGCACTGGGAGCAGAGCATACCTGCGCAATGAGAAGATCGAATGGTACAGTGGTTTGTTGGGGCGGTGGAGGGCGGTTCTCGCCTAATGTGATAGAaggaatttcttttgaattaattgtttcaGGTTCGAATTTTACTTGTGGATTGATAACAAGCAATTTATCTGTCATGTGTTGGGGACCTGGCTGGCTTAATAGTTCAAGTTCTGTGCTTCCCTTGCCCCCTATTCTTCCAGGGCCATGTGTTCAATCTTGTGAGTGTGGAATATATCCTTCCTCTCAAAATATATGCTCTGGTTCTGGTAGCATTTGCAGGCCATGTTGGCCACCAATGTCATTGCCGGCGCCACCGGCACCATCATCACAAGCGTCACCGCCTTCACTTTCTCCTCCATCGTCTACATCTAGGGGGTTGAGAAGGGGTCTGTTGGCATTTGCCATTGTTGGATCTGTTGGAGCTTTTGCTGGGATTTGCTCAATAATTTATTGCTTGTGGACTGGAGTTTGTTTTGGGAACAAGAAAATCCACAATTCTGTGCAACCCACAATCACTAGAGGTGGAAGTTCCAATAATGGGGCCAATTCAAATAATAGTCCACCTTCAAGGTCATCTACCATTAGGCGCCAAGGCTCGAGAATAATGAGGCGGCAGAGGAGTGGAACCTCCTCAACAAAGCACCCAGATAGAGCAGAAGAATTCACCTTCGCTGAGCTTGTAGCAGCCACCAACAATTTCTCTCTGGAGAACAAGATTGGTGCTGGAAGCTATGGTGTTGTGTACAGAGGCAAGCTTCCAGATGGCCGCGAAGTGGCGATTAAAAGGGGGGAAACAGGTTCtaagttgaagaaatttcaagagaaagaaagtgcTTTTGAGTCTGAATTGGCATTCTTGTCCCGTCTACACCACAAGCACTTAGTTAGGTTAGTTGGGTTCTGTGAAGAGAAGGAGGAAAGGCTTTTGGTGTACGAATACATGAAGAATGGTGCATTATATGATCATTTGCATGGGAAGAACAATGTTGAAAAGAGCCGTAGTGTATTGAATTCATGGCAAATGAGGATCAAACTCGCGCTAGATGCCTCGCGAGGAATCGATTATCTCCATAGTTATGCAGTTCCTCCTATAATTCACAGAGACATCAAGTCTTCCAACATTCTAATTGATGCAACATGGACGGCAAGAGTGTCTGATTTCGGATTATCAATGATGGGTCCAGATTCTGAGCAAGATTACCGGCCAGCCAAGGCAGCAGGAACAGTTGGATACATTGATCCCGAGTACTATGGTCTTAACGTATTGACAACAAAGAGTGATGTTTATGGTCTTGGAATAGTTCTCCTAGAACTTCTCACGGGGAAGAGAGCTATATTCAaggatgatgaaaatggaggCACCCTGATCAGTGTGGTGGATTTTGCAGTGCCAGCAATTCTGGGTGGAGAAATGGTCAAAGTTTTGGACCCAAGAGTTGGTCCACCATCTTCAAACGAAGCAGAGGCTGTGGAGCTCGTAGCCTTTATTGCTGTTCGTTGTGTAAATTTGGAAGGGAAGGATAGACCAACAATGGCTGATATTGTGTCTAATTTGGAGCGGGCTTTGGATTCTATTGATGCCAGTCACGGAAGCATTTCCAGCGGTAATATCTCTATTGTTTCACAATG 2393 0.4505 MKKVPSPFVTVPVNVSLAVAVILFSLIISSHALGSGATLSINDASATVCGIVAEEPRQRIECYSREEVIPVAPNISFSSISGGRDDFCGLRSGNYSLLCWNTVSANDSFQSKRLYYNDTVPLENLALGDNQICATIVGSGNLRCWRTNNTFEWSESDQFTSITSGSGFSCGILRNSSQVRCWGNRFIANQIEDEFRNMTMATLVAGDSHVCGLNQTGFLLCKGSNSSEQLNVPQGESPQYTGLALGAEHTCAMRRSNGTVVCWGGGGRFSPNVIEGISFELIVSGSNFTCGLITSNLSVMCWGPGWLNSSSSVLPLPPILPGPCVQSCECGIYPSSQNICSGSGSICRPCWPPMSLPAPPAPSSQASPPSLSPPSSTSRGLRRGLLAFAIVGSVGAFAGICSIIYCLWTGVCFGNKKIHNSVQPTITRGGSSNNGANSNNSPPSRSSTIRRQGSRIMRRQRSGTSSTKHPDRAEEFTFAELVAATNNFSLENKIGAGSYGVVYRGKLPDGREVAIKRGETGSKLKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKEERLLVYEYMKNGALYDHLHGKNNVEKSRSVLNSWQMRIKLALDASRGIDYLHSYAVPPIIHRDIKSSNILIDATWTARVSDFGLSMMGPDSEQDYRPAKAAGTVGYIDPEYYGLNVLTTKSDVYGLGIVLLELLTGKRAIFKDDENGGTLISVVDFAVPAILGGEMVKVLDPRVGPPSSNEAEAVELVAFIAVRCVNLEGKDRPTMADIVSNLERALDSIDASHGSISSGNISIVSQ 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01698 797 CDD STKc_IRAK 494 775 - -
Bva12g01698 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Bva12g01698 797 Pfam Protein kinase domain 489 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01698 797 Gene3D Phosphorylase Kinase; domain 1 449 568 - -
Bva12g01698 797 MobiDBLite consensus disorder prediction 424 470 - -
Bva12g01698 797 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 10 794 IPR044815 GO:0004674
Bva12g01698 797 MobiDBLite consensus disorder prediction 424 451 - -
Bva12g01698 797 ProSitePatterns Protein kinases ATP-binding region signature. 494 516 IPR017441 GO:0005524
Bva12g01698 797 ProSiteProfiles Protein kinase domain profile. 488 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01698 797 Gene3D Transferase(Phosphotransferase) domain 1 569 789 - -
Bva12g01698 797 Gene3D - 200 347 IPR009091 -
Bva12g01698 797 Gene3D - 9 199 IPR009091 -
Bva12g01698 797 SUPERFAMILY RCC1/BLIP-II 68 305 IPR009091 -
Bva12g01698 797 SUPERFAMILY Protein kinase-like (PK-like) 465 773 IPR011009 -
Bva12g01698 797 SMART serkin_6 488 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01698 797 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 10 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01698 Bva-Chr12 14244616 14247361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01698 10 797 Receptor kinase-like Gene Family AT3G55950 59.559 0.0 876
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Bva12g01698 Pkinase 2.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01698 - - gmx:100798905 1095.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01698 12 14244616 14247361 Bva12g01359 12 12094332 12097111 ECH
Bva12g01698 12 14244616 14247361 Bva12g01698 12 14244616 14247361 ECH