Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01697 ATGACCTCAGTTAGCCACCACCCACCGCCTCTCTCGGACTCCGACGCCGATTCTGACCATGGGCATTCTACTTCCGAGCTCCTCCGTCATACGGACCTCTTGGACTCCATATTCAAATCCTATTTCGAATTCACTGGCCAATCAACGGCAACTGCAGCTGATCTCTCAAAAATCCAATCTTTCCtcacctcctcctcctctgGCGCTCTATCATGTTTGATATGCCTCGAACGCATCAGAATCTCTGATCCCACCTGGTCATGTACCTCCCTCTGCTTTGCTGTCTTCCATCTATTTTGCATCCAGAGCTGGGCACGCCAGGCAACGGACCTCGCCGCTGCACGCGCTGCAACGCGCCTCCCCATTACAGCTGACAAGGCTGCAGAATCTGCTTTATGGAACTGCCCCAAATGCAGGGTCGAATACTCCAAAACCCAAATTCCCAAGTCTTATATGTGTTTCTGTGGAAAATTGGAGAACCCGCCTAGTGATGATCCATGGATTTTGCCACATTCATGTGGTGAGATTTGCGGTAGGCCATTGAAGAACAATTGCGGTCACCATTGCCTGTTGCTGTGCCATCCTGGGCCATGTCCATCGTGCCCAAAACTTGTCAAAGTTCGGTGCTTTTGCAGTTCTATCGAGGATGTTCGCCGATGTGGGTTTAAGGAATTCTCCTGCAATAATCCCTGTTCAAAGGTCTTGGACTGTCGTGCTCACAGATGCTCGGAGATTTGCCACGATGGTCCATGCCCACCTTGCCGAGCCCGTGGGGTTTATTGGTGCCAATGTAGGAACAAGAAGGAGGAGAGGGAGTGTTGTGATCGCAATTTCCAATGTGATAAGCCGTGTGAGAAAGTACTTAGGTGTGGGAAGCATGTTTGTGAGAAAGGGTGTCATTCGGGTGACTGTGGCGAGTGCCCTTTCCAGGGGAAGAGAACTTGTCCCTGTGGAAAGAGAGTGTATGAAGGAATGCCTTGTGATGCTGCGGTACCTTTGTGTGGAGCGACCTGTGATAAGATGTTGGCTTGCGGGTATCATAGGTGTCCAGAGCGATGCCACCGCGGGCCATGCATAGAGACTTGCAGAATCGTTGTCAAGAAGTCCTGTCGTTGTGGAAGTTTGAAGAAAGATGTTCCTTGCTATCAAGATTTGTCATGTGAAAGGAAGTGTCAGAGGCTACGTGACTGTGGCCGGCACCCATGCAAACGGCGCTGCTGTGGTGGGGAATGCCCTCCATGCTCAGAGATATGTGGCAGGAAGCTTCGTTGTAGGAACCATAAATGTCCATCACCATGCCATAGAGGTGCCTGTGCTCCTTGTCCAATAATGGTGACAATCTCATGTGCTTGTGGTGAGACGCATTTTGAGGTTCCTTGTGGTACTGAGATGGATCAAAAGCCACCTAAATGTCGTAAAAAATGTGACATTACTCCTTTGTGCAGGCATGCATCGACATGCAAGccaCACAAATGTCATTATGGAGCCTGCCTTCCTTGTCGGCTACCTTGTGGAGAAGAGTTTCCATGCAGCCACACATGCAAATTAAGGTGTCATGGAGCTAAACCTCCTCCTAAGCCAGAGTTTACActgaaaccaaagaaaaagaagacaataCAACAGAGTGAATGTGTTCCTGGCACTCCATGCCCTCCTTGCCCAGAACTTGTGTGGACACCATGTCTTGGCCAACACTTTGGGGCAGAGAGAATGATGGTCTGCTCTGATAAATCACAATTCTCCTGTGAAAATTTGTGCGGAAACCCTCTACCATGCAGTAATCATTATTGTACTAAAACCTGTCATGCCCTAGAGAGCCAGGCATCCttgaaccaaagaagtgagcCTTGTGAAGATTGTCGTCTTAAATGCGAAAAGGAAAGAAAGCCTATCTGTCCACATCCCTGTCCTCGGCGGTGCCATCCTGGAGACTGCCCACCATGCAAAGTGCTCATCAAGCGATCGTGTCACTGTGGCTCAATGGTCCATGTTTTTGAGTGCATATACTATAATAGCTTGTCTTCAAAGGATCAAGAGACTGCCCGTTCATGTGGTGGTCCTTGCCATAGAAAGTTGCCAAATTGTACACATCTATGCCCAGAGACATGTCATCCTGGTCCATGCCCATATCCTGAAAAATGCTGTAAAAAGGTCAATGTTCGTTGCAAATGCCAAACATTGAAAAAAGAGTGGTTATGTCAAGATGTCCAAGCAGCTTACCATGCTGCTGGTTGCGATCCAAAAGAAATACCTAAAAATCAGTATGGGATTGGGCTTATCCCTTGCAATTCTGATTGTAAGAGTAGAGTTCAAGTCGTTGAGTCAGAACTACAGTTACGTAAATCTAGAGTTGTAGAGGAGAAAGAGCCAGATACTGAGAAGTCTGTTCCGAAGCGAAGAAAAAGGCGGGAACGTGTACAAGAATCCAAGCAAACATCAAAACTGCAGAAAATTGTTTCCACCACAAAGCAGCTTCTTCTATTTGTCGTTCTTTTCATGGCTCTCCTCGCTGCTGCATACTATGGTTACAATGGTCTTCTGTGGCTCTCTGATTGGATGAATGAAATTGAGGAGCAAAGACAAAGAAGATATTCTCGAATTTCATG 2606 0.4647 MTSVSHHPPPLSDSDADSDHGHSTSELLRHTDLLDSIFKSYFEFTGQSTATAADLSKIQSFLTSSSSGALSCLICLERIRISDPTWSCTSLCFAVFHLFCIQSWARQATDLAAARAATRLPITADKAAESALWNCPKCRVEYSKTQIPKSYMCFCGKLENPPSDDPWILPHSCGEICGRPLKNNCGHHCLLLCHPGPCPSCPKLVKVRCFCSSIEDVRRCGFKEFSCNNPCSKVLDCRAHRCSEICHDGPCPPCRARGVYWCQCRNKKEERECCDRNFQCDKPCEKVLRCGKHVCEKGCHSGDCGECPFQGKRTCPCGKRVYEGMPCDAAVPLCGATCDKMLACGYHRCPERCHRGPCIETCRIVVKKSCRCGSLKKDVPCYQDLSCERKCQRLRDCGRHPCKRRCCGGECPPCSEICGRKLRCRNHKCPSPCHRGACAPCPIMVTISCACGETHFEVPCGTEMDQKPPKCRKKCDITPLCRHASTCKPHKCHYGACLPCRLPCGEEFPCSHTCKLRCHGAKPPPKPEFTLKPKKKKTIQQSECVPGTPCPPCPELVWTPCLGQHFGAERMMVCSDKSQFSCENLCGNPLPCSNHYCTKTCHALESQASLNQRSEPCEDCRLKCEKERKPICPHPCPRRCHPGDCPPCKVLIKRSCHCGSMVHVFECIYYNSLSSKDQETARSCGGPCHRKLPNCTHLCPETCHPGPCPYPEKCCKKVNVRCKCQTLKKEWLCQDVQAAYHAAGCDPKEIPKNQYGIGLIPCNSDCKSRVQVVESELQLRKSRVVEEKEPDTEKSVPKRRKRRERVQESKQTSKLQKIVSTTKQLLLFVVLFMALLAAAYYGYNGLLWLSDWMNEIEEQRQRRYSRIS 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01697 868 MobiDBLite consensus disorder prediction 783 808 - -
Bva12g01697 868 CDD NF-X1-zinc-finger 227 275 - -
Bva12g01697 868 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 13 863 IPR034078 GO:0003700
Bva12g01697 868 SMART znfxneu3 632 650 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 SMART znfxneu3 424 443 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 SMART znfxneu3 397 416 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 SMART znfxneu3 487 502 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 SMART znfxneu3 290 309 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 SMART znfxneu3 592 622 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 SMART znfxneu3 344 364 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 SMART znfxneu3 695 717 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 SMART znfxneu3 185 203 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 SMART znfxneu3 237 256 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 13 863 - -
Bva12g01697 868 MobiDBLite consensus disorder prediction 1 23 - -
Bva12g01697 868 CDD NF-X1-zinc-finger 387 435 - -
Bva12g01697 868 CDD NF-X1-zinc-finger 414 462 - -
Bva12g01697 868 Pfam NF-X1 type zinc finger 344 362 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 Pfam NF-X1 type zinc finger 290 308 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 Pfam NF-X1 type zinc finger 397 415 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 Pfam NF-X1 type zinc finger 185 202 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 Pfam NF-X1 type zinc finger 491 501 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 Pfam NF-X1 type zinc finger 240 255 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 Pfam NF-X1 type zinc finger 634 649 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 Pfam NF-X1 type zinc finger 592 602 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 Pfam NF-X1 type zinc finger 418 442 IPR000967 GO:0005634|GO:0008270
Bva12g01697 868 CDD NF-X1-zinc-finger 173 221 - -
Bva12g01697 868 CDD NF-X1-zinc-finger 334 383 - -
Bva12g01697 868 MobiDBLite consensus disorder prediction 783 798 - -
Bva12g01697 868 CDD NF-X1-zinc-finger 280 327 - -
Bva12g01697 868 SUPERFAMILY RING/U-box 70 147 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Bva12g01697 zf-NF-X1 0.004 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01697 K15683 - gmx:100799540 1472.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01697 12 14236791 14243553 Bva12g01697 12 14236791 14243553 ECH