Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01693 ATGGCCACAAGATCTACTGGATCGTTGATTTTGGTCTGTCTTGTGTGGATTCTGGTTCTTTGCGCTACTATAGCATTCATTCAAGTAAAGTTGGTAGACAATGGAAGAGACTCCTCTGAGAAGAGGTCGATAACAAGTGAGCTCCTTGAGGAAAATTCAACGGGAGAAGATTTGGAGGCAGTGACTCACAAAGTGTATTTTGATGTAGAGATCGATGGAAAAGTTGCGGgTCGCATAGTGATGGGTCTTTTTGGGACAACAGTTCCTAAAACTGTAGAAAACTTCCGAGCACTTTGCACGGgagagaaaggaaagggaaaaagcGGTAAGCCTCTTCATTACAAAGGAAGTACATTCCATAGGATTATACCCAGCTTTATGGTCCAAGGTGGTGATTTTACTCGAGGTGATGGACGAGGTGGAGAATCAATCTATGGTGCTAAGTTTGCTGATGAAAACTTCAAACTGAAGCATACTAAGCCAGGATATTTGTCGATGGCAAACGCTGGGCCTGACACCAATGGCTCACAGTTCTTCATAACTACTGTCAAAACCAGCTGGTTGGATGGACGCCATGTTGTATTTGGCAAGGTGCTGGACGGAATGGACGTTTTGTACAAGATTGAAGCTGAAGGAAGTGAAAATGGACTTCCCAAAAGCAAAGTTGTCATTTTAGACAGTGGGGAATTATCTTCATG 698 0.4183 MATRSTGSLILVCLVWILVLCATIAFIQVKLVDNGRDSSEKRSITSELLEENSTGEDLEAVTHKVYFDVEIDGKVAGRIVMGLFGTTVPKTVENFRALCTGEKGKGKSGKPLHYKGSTFHRIIPSFMVQGGDFTRGDGRGGESIYGAKFADENFKLKHTKPGYLSMANAGPDTNGSQFFITTVKTSWLDGRHVVFGKVLDGMDVLYKIEAEGSENGLPKSKVVILDSGELSS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01693 232 CDD cyclophilin_ABH_like 63 228 - -
Bva12g01693 232 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 67 226 IPR002130 GO:0000413|GO:0003755
Bva12g01693 232 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 114 131 IPR020892 GO:0003755|GO:0006457
Bva12g01693 232 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-2 38 230 - -
Bva12g01693 232 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 66 229 IPR002130 GO:0000413|GO:0003755
Bva12g01693 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 177 189 IPR002130 GO:0000413|GO:0003755
Bva12g01693 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 IPR002130 GO:0000413|GO:0003755
Bva12g01693 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 83 98 IPR002130 GO:0000413|GO:0003755
Bva12g01693 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 190 205 IPR002130 GO:0000413|GO:0003755
Bva12g01693 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 162 177 IPR002130 GO:0000413|GO:0003755
Bva12g01693 232 SUPERFAMILY Cyclophilin-like 60 230 IPR029000 -
Bva12g01693 232 Gene3D - 52 232 IPR029000 -
Bva12g01693 232 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 38 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01693 Bva-Chr12 14216978 14219393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01693 77 227 U-box Gene Family AT5G67530 41.830 1.26e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01693 K01802 - gmx:100798499 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01693 12 14216978 14219393 Bva12g01693 12 14216978 14219393 ECH