Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01692 ATGCTTGAGGGAGAGAAGCTCTCAGCCAAAAAGGGCCTCACCGAAAGAGAGAAAACTGCTCTCCATGATTGCTTGGACACCAGTGATGAGACCCTCGACGAGCTTCAGAAGACTCTGATAGATCTCCGAGAGTACCCAAACAAGAAGTCCTTGACACAGCACGCAAATGACCTCAAGACTCCGATCAGCGCCTCCATTACCAACCAAGTTACTTGCTTGGATGGGTTCTATGACGATGGTAACAAGGAAATCAGGGAAGCTCTGCAAGATGGACAAGTGCACGTGGAGCACATGTGCAGCGACGCATTGGCTATGATCAGGAACATGACTGATACCGACATTGCCAATTACGAGAAGGATACAAGAATCACAAGCAGGAAGCTGGAGGAGGAGAAGCAGGGGATTGTGTGGCCAGAGTGGATGTCGGCGGGAAAAAGGCGGCTTCTTCAGGCGGAGACGTGGAGGCCGACGTGGCGGCGGCGCAGGACGACAGTGTTCATCGCTGccttctccattttctctaGACTACACCAACTCTCTCTGTA 545 0.5064 MLEGEKLSAKKGLTEREKTALHDCLDTSDETLDELQKTLIDLREYPNKKSLTQHANDLKTPISASITNQVTCLDGFYDDGNKEIREALQDGQVHVEHMCSDALAMIRNMTDTDIANYEKDTRITSRKLEEEKQGIVWPEWMSAGKRRLLQAETWRPTWRRRRTTVFIAAFSIFSRLHQLSL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01692 181 SMART PMEI_2 3 105 IPR006501 GO:0004857
Bva12g01692 181 PANTHER PECTINESTERASE 8 155 - -
Bva12g01692 181 Gene3D Invertase/pectin methylesterase inhibitor family protein 4 110 IPR035513 -
Bva12g01692 181 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 109 IPR006501 GO:0004857
Bva12g01692 181 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 9 110 IPR035513 -
Bva12g01692 181 CDD PMEI-like_3 5 110 - -
Bva12g01692 181 Pfam Plant invertase/pectin methylesterase inhibitor 11 105 IPR006501 GO:0004857
Bva12g01692 181 PANTHER PECTINESTERASE 8 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01692 Bva-Chr12 14214369 14216492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01692 10 151 Carbohydrate Esterase AT3G14310 61.250 2.18e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01692 K01051 - rcu:8276562 206.453