Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01682 ATGGCCACCGCCGCCGCCGCCTCATACTTCTTCGGCACCCGTCTCGGCAACGCCGCTTCAAACTCGGGAAGAGTCCAAGCCTTATTGAAGTTCGGCACCAAGAAGGCTCCGCCACCACCTAAGAAAACCAAAAGCCCACCAACTCCGAGGCAAGATTCGGGTAGTCTCGTCTGGTTCCCGGGTGCCCAACCACCCGAATGGCTCGATGGAACCATGATCGGTGACCGGGGATTCGATCCATTCGGGTTTGCAAAACCCGCTGAGTACTTGCAGTTCGACTTGGACTCGCTGGACCAGAATTTGGCCAAGAATGTTGCAGGAGAAATTATCGGTACCAGGGTGGATGCCACGGAGGTCAAACCGACGCCATTCCAGCCCTACTCTGAAGTCTTTGGCATACAAAGGTTCCGAGAGTGTGAGGTCATTCACGGTAGGTGGGCAATGCTGGGATCACTTGGCGCCTTGGCTGTTGAGGCACTCACTGGTGTCTCGTGGCAGGACGCAGGAAAGGTGGAGCTCGTGGAAGGATCCTCGTACCTGGGGTTTACCCTTCCGTTCTCGCTGACGCAATTGATCTGGATAGAGGTGATATTGATAGGGTACATTGAGTTCCAAAGGAATGCAGAACTTGACCCAGAGAAAAGGTTATACCCAGAGGTTAAGCATTCTCGCTTGGCCATGGTGGCATTCCTCATCTTTGGAATCATAGCTGCTACAACTGGGAAGGGCCCTATCGCTTTTGTTGCTACCTTTAACAAATG 761 0.5348 MATAAAASYFFGTRLGNAASNSGRVQALLKFGTKKAPPPPKKTKSPPTPRQDSGSLVWFPGAQPPEWLDGTMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNVAGEIIGTRVDATEVKPTPFQPYSEVFGIQRFRECEVIHGRWAMLGSLGALAVEALTGVSWQDAGKVELVEGSSYLGFTLPFSLTQLIWIEVILIGYIEFQRNAELDPEKRLYPEVKHSRLAMVAFLIFGIIAATTGKGPIAFVATFNK 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01682 253 MobiDBLite consensus disorder prediction 30 56 - -
Bva12g01682 253 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 218 IPR001344 GO:0009765|GO:0016020
Bva12g01682 253 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 219 253 - -
Bva12g01682 253 Pfam Chlorophyll A-B binding protein 64 235 IPR022796 -
Bva12g01682 253 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 219 253 IPR001344 GO:0009765|GO:0016020
Bva12g01682 253 SUPERFAMILY Chlorophyll a-b binding protein 54 250 - -
Bva12g01682 253 Gene3D Chlorophyll a/b binding protein domain 55 215 - -
Bva12g01682 253 Gene3D Chlorophyll a/b binding protein domain 216 253 - -
Bva12g01682 253 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 2 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01682 Bva-Chr12 14174798 14176418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01682 11 250 Chloroplast and Mitochondria Gene Families AT3G08940 62.121 1.83e-111 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01682 K08915 - egr:104454394 392.504