Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01678 ATGAATCCTGTCAGACCCTACTCGTGTGCATTCTCTTCCTTATACCCTCCAATGATTCTTCTCTTCACTTTGTACTTGCTGTGGCAGCTACCTGTGCTGTCTACTTGTGCTCCAACAAATGAGACTGATAGATTGGCTTTGCTCAAGTTTAAAGAATCAATAAGCAATGACCCAAATGAAGTACTGAGTATGTGGAATGGATCAATTCACTTCTGCAACTGGCTTGGAGTTACGTGCAGCAGCAAGCACCAGCGAGTGATAGCCTTGGATCTTCATGGCTATAAGCTTGGGGGATTCATATCACCTTATATTGGAAACCTCTCCTTCCTTAGATCCATAAATCTGAAAAATAACAGCTTGCATGGCCAAATTCCAGAGGaatttagtcatttatttCGACTGCAAAATCTTGAGCTTGCCAATAACTCATTTACAGGGGAAATCCCAACCAGCTTGGCCAATTGCTCTCAGCTTAGAGCCATTGACCTCGCAGGAAATATCTTGACAGGGACTATCCCAAGCCAGTTTGGATCTTTGGCAAAACTGGAAATGCTTTTTCTTGATCAAAACAACCTGACAGGAGCCTTGCCAACTTCCTTAGGTAATATTTCATCACTCAAATATTTTGGAGTAACATACAACACTTTAGAGGGAACCATTCCAGATGATCTGggccatttaaaaaatttatctcttttcttgattGGAAGTAATAAGCTGTCTGGTCAAGTCCCTTATTCCCTTTTCAATATATCTTCCATGAACACTTTCTCAACCACAGCTAATGAACTAAATGGAACTATACCAGACTACATTAGCTTCACACTCCCTAACCTCCAAGTACTTGAATTTGGTGGCAATCAATTTTCTGGCTCCATTCCAATTTCATTGTCCAATATTTCTAGCCTTCAAGTCGTTGATTTCTATGGTAATAGTTTTGTGGGACCAGTTCCAACAAACCTGGGAAATCTACAAAGTCTTTGGTGGCTAGGATTAGGAGAAAATAACCTTGGAAGTAACTCGAGTAAAGACTTAGATTTCTTAGATTCTGTAGTGAACTGTAGCAACCTGGAGTATTTTGATTTGGGTTCAAACAATGTTGGAGGTGTTTTGCCCAAAACAATTGGCAATCTCTCCACCCAAATCAGGCAGctatattttgatttcaatcaaataattgGTAACATCCCAGAAGAAATTGGAAATCTGATAAACTTGGCTGTCTTAACCATGGGGGACAACCTCTTCACAGGCATCATTCCTACTTCTTTTGGGAACCTCAAAAAGATGCAAGTCATGTCTCTCAGTGGGAACAGATTGTCTGGACTTATTCCACCCTCCATAGGAAATCTTACTCCGTTGAATAGACTTTTTCTGTTTAATAACAGATTACAAGGGAGCATTCCTTCAAGCATGGGAAATTTCCGAAACTTGCAATACTTGGACATGTCACAAAACAACCTCAGTGGAACGATTCCCTCGCAGgttattggtctttcttccttatcACAGCTATTCAACTTATCAAGAAATTCATTAAGTGGGAGCCTACCTAGGGAAGTAGGCAATATGAAGAATGTTAACTCACTGGATCTCTCGGAAAATGATTTGTCTGGTGAAATTCCTGAAACTATTGGAGGATGTGTGAGCTTAGAATACCTTTACTTGCAAGGAAACTCCTTTCAAGGTGGCATACCTTCAACTTTGGCTTCATTAAGTGGTCTTCGTGTTTTAAACCTCTCACAAAACAACTTGTCAGGAGAAATTCCACAAGATCTTCAAAGACTTCCCTCTTCTGTATATATGAACTTATCATTTAACAATCTTGAGGGCGAGATACCAAAAGAAGGAGCTTTCAGAAGTGCTAGTGCCATATCAGTGGCTGGAAACAGTTTACTTTGTGGGGGTGTACCGGAACTGCAGCTGCCACCATGTCCAGTCAAAGTGATGGAACGCAGAAAAAGTCATACCTTGAGGTTAGTCATCATAATTGTATGTGTGgtcttatttttcattctattGGCAGCACTCTTTGCAATTTATTGGATCAGAAAACCAAAGAAGACATCATCTTCTAATTCCTCAACAAAGGAGGATCTTTCTAAGGTTTCATATGGAAGGCTACATAAGGCAACTGGTGGTTTTTCTTCCAGTAACTTGATAGGATCCGGTAGTTTTGGTTCTGTATATAAAGGGATTATGGATTCCGAGCAAAGACCAGTAGCTGCGAAGGTCCTAAACCTCCAGAAGAAAGGAGCTTCAAAGAGTTTCATGGCTGAATGCAATGCCTTAAGAAGCATCAGGCACAGAAACCTTGTTAAGATATTAACTTGTTGCTCTAGCACTGATTACAAAGGCAATGATTTCAAAGCTCTAGTCTTTGAATTCATGGAAAATGGAAGCTTGGAGAACTGGTTGCACCTTGAGAAAGGTTTGAATCAACCCTTAAGCCTTCTTCAGAGACAAAATATTGCAATAGATGTGGCTTCTGCTATACACTATCTTCACTATGAATGTGAACAAGCAATCATTCATTGTGATTTAAAGCCTACCAATATCTTACTTGATTCTGACATGGTTGCCCATGTCAGCGATTTTGGTTTAGCGAGGCTTCTCTCCGCCACAAACCAGGTTCGTCAAAAGCAAAGCAGTACAGTTGGATTAAAGGGCACTGTGGGATATGCTGCCCCAGAGTATGCAATGGGAGGTGAGGCATCAAAGCAGGGAGATGTTTATAGCTTTGGAATCTTACTGTTGGAGATGTTCACTGGAAAAAGACCCACCCACGAGATATTTACAGACGGCTTCAATCTTCATAATTACGTCAAAGCTGGGTTGTGCCAAAACCTTGCTGATATTGTTGACCCAATTCTCGTTCAGAGAGAAGCAGAGAATGCAGCAAATAGCTGCAACAATTTTTATGAAGATATCAAGGCAGAAAGAGGAAACACCAGTATGAATCAAAGTCAGACGCTGACAGATGCTAAAATCCACGATTGTTTGGTATCAGTTTTCGAGTTGGGACTTGCCTGCTGTTTGGAGTCTCCCAAAGAAAGAATCACCATGCAGGTTACCACCCAAAAGCTACATCAGATCAGAGATGCCTTACATGGTGTTTG 3119 0.3976 MNPVRPYSCAFSSLYPPMILLFTLYLLWQLPVLSTCAPTNETDRLALLKFKESISNDPNEVLSMWNGSIHFCNWLGVTCSSKHQRVIALDLHGYKLGGFISPYIGNLSFLRSINLKNNSLHGQIPEEFSHLFRLQNLELANNSFTGEIPTSLANCSQLRAIDLAGNILTGTIPSQFGSLAKLEMLFLDQNNLTGALPTSLGNISSLKYFGVTYNTLEGTIPDDLGHLKNLSLFLIGSNKLSGQVPYSLFNISSMNTFSTTANELNGTIPDYISFTLPNLQVLEFGGNQFSGSIPISLSNISSLQVVDFYGNSFVGPVPTNLGNLQSLWWLGLGENNLGSNSSKDLDFLDSVVNCSNLEYFDLGSNNVGGVLPKTIGNLSTQIRQLYFDFNQIIGNIPEEIGNLINLAVLTMGDNLFTGIIPTSFGNLKKMQVMSLSGNRLSGLIPPSIGNLTPLNRLFLFNNRLQGSIPSSMGNFRNLQYLDMSQNNLSGTIPSQVIGLSSLSQLFNLSRNSLSGSLPREVGNMKNVNSLDLSENDLSGEIPETIGGCVSLEYLYLQGNSFQGGIPSTLASLSGLRVLNLSQNNLSGEIPQDLQRLPSSVYMNLSFNNLEGEIPKEGAFRSASAISVAGNSLLCGGVPELQLPPCPVKVMERRKSHTLRLVIIIVCVVLFFILLAALFAIYWIRKPKKTSSSNSSTKEDLSKVSYGRLHKATGGFSSSNLIGSGSFGSVYKGIMDSEQRPVAAKVLNLQKKGASKSFMAECNALRSIRHRNLVKILTCCSSTDYKGNDFKALVFEFMENGSLENWLHLEKGLNQPLSLLQRQNIAIDVASAIHYLHYECEQAIIHCDLKPTNILLDSDMVAHVSDFGLARLLSATNQVRQKQSSTVGLKGTVGYAAPEYAMGGEASKQGDVYSFGILLLEMFTGKRPTHEIFTDGFNLHNYVKAGLCQNLADIVDPILVQREAENAANSCNNFYEDIKAERGNTSMNQSQTLTDAKIHDCLVSVFELGLACCLESPKERITMQVTTQKLHQIRDALHGV 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01678 1039 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Bva12g01678 1039 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Bva12g01678 1039 SUPERFAMILY Protein kinase-like (PK-like) 690 1026 IPR011009 -
Bva12g01678 1039 SUPERFAMILY L domain-like 38 337 - -
Bva12g01678 1039 CDD STKc_IRAK 721 1022 - -
Bva12g01678 1039 Pfam Leucine rich repeat 133 192 IPR001611 GO:0005515
Bva12g01678 1039 Pfam Leucine rich repeat 507 560 IPR001611 GO:0005515
Bva12g01678 1039 Pfam Leucine rich repeat 405 464 IPR001611 GO:0005515
Bva12g01678 1039 Pfam Leucine rich repeat 566 609 IPR001611 GO:0005515
Bva12g01678 1039 Gene3D Ribonuclease Inhibitor 344 646 IPR032675 -
Bva12g01678 1039 Pfam Protein kinase domain 717 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01678 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Bva12g01678 1039 PANTHER OS04G0122200 PROTEIN 29 1032 - -
Bva12g01678 1039 PRINTS Leucine-rich repeat signature 478 491 - -
Bva12g01678 1039 PRINTS Leucine-rich repeat signature 572 585 - -
Bva12g01678 1039 ProSiteProfiles Protein kinase domain profile. 715 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01678 1039 PANTHER LRR RECEPTOR-LIKE KINASE 29 1032 - -
Bva12g01678 1039 Gene3D Ribonuclease Inhibitor 40 199 IPR032675 -
Bva12g01678 1039 Gene3D Phosphorylase Kinase; domain 1 679 796 - -
Bva12g01678 1039 SMART serkin_6 715 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01678 1039 SMART LRR_typ_2 179 202 IPR003591 -
Bva12g01678 1039 SMART LRR_typ_2 427 451 IPR003591 -
Bva12g01678 1039 SMART LRR_typ_2 475 499 IPR003591 -
Bva12g01678 1039 SMART LRR_typ_2 403 426 IPR003591 -
Bva12g01678 1039 SMART LRR_typ_2 107 130 IPR003591 -
Bva12g01678 1039 SMART LRR_typ_2 276 300 IPR003591 -
Bva12g01678 1039 SMART LRR_typ_2 572 596 IPR003591 -
Bva12g01678 1039 SMART LRR_typ_2 524 548 IPR003591 -
Bva12g01678 1039 SMART LRR_sd22_2 354 380 - -
Bva12g01678 1039 SMART LRR_sd22_2 179 205 - -
Bva12g01678 1039 SMART LRR_sd22_2 427 453 - -
Bva12g01678 1039 SMART LRR_sd22_2 276 302 - -
Bva12g01678 1039 SMART LRR_sd22_2 475 501 - -
Bva12g01678 1039 Gene3D Transferase(Phosphotransferase) domain 1 797 1037 - -
Bva12g01678 1039 ProSiteProfiles Leucine-rich repeat profile. 574 597 IPR001611 GO:0005515
Bva12g01678 1039 SUPERFAMILY L domain-like 380 635 - -
Bva12g01678 1039 Gene3D Ribonuclease Inhibitor 274 343 IPR032675 -
Bva12g01678 1039 Gene3D Ribonuclease Inhibitor 204 273 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01678 Bva-Chr12 14156257 14159465 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01678 32 1034 Receptor kinase-like Gene Family AT3G47570 45.919 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva12g01678 Pkinase 5.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01678 - - qsu:111999857 1101.27