Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01669 ATGGACGAGGGCATGTCAGGCTTTTGCATAAGAGCTGCAAGTGTTGGTGGGAATAGCAGCAGCACTGGGACTAAGTGTGGGCGTTGGAATCCCACTGCCGAACAGGTTAAGCTTCTCACTGACCTCTTCAGGTCTGGACTCAGAACCCCAAGTACTGATCAGATTCAAAAGATCTCCACTCAGCTCAGCTTTTATGGTAAGATTGAGAGCAAGAATGTCTTCTACTGGTTTCAGAACCATAAAGCTAGGGAAAGACAGAAGCGTCGCAAAGTTTCCTTTGATGAGAAGGATATCATGATTCGTCGAGATAGCgctaaaatttcttatacaCAAAATTTTGCAGAGGTGAATCATGTTTCAGAGCCAGAGAGGGTGATTGAGACACTTCAACTATTCCCCTTGAATTCCTTTGGTGAAGCAGAAAGTGAGAAGCAGAAGCTGAGGGTGCACGCAAATGATCAATATAGGGGAAATACAATGTTTTCATGCACAATGGGGGAACAAATGGAACATCCACCACTAGATCTGCGCTTGAGCTTTGCGTA 545 0.4404 MDEGMSGFCIRAASVGGNSSSTGTKCGRWNPTAEQVKLLTDLFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDEKDIMIRRDSAKISYTQNFAEVNHVSEPERVIETLQLFPLNSFGEAESEKQKLRVHANDQYRGNTMFSCTMGEQMEHPPLDLRLSFA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01669 181 CDD homeodomain 28 88 IPR001356 GO:0003677
Bva12g01669 181 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 170 IPR044555 GO:0003700|GO:0099402
Bva12g01669 181 SMART HOX_1 24 91 IPR001356 GO:0003677
Bva12g01669 181 SUPERFAMILY Homeodomain-like 27 89 IPR009057 -
Bva12g01669 181 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 170 - -
Bva12g01669 181 Gene3D - 25 93 - -
Bva12g01669 181 ProSiteProfiles 'Homeobox' domain profile. 22 87 IPR001356 GO:0003677
Bva12g01669 181 Pfam Homeodomain 26 86 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01669 Bva-Chr12 14115847 14116741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01669 8 180 Wox Gene Family AT3G11260 59.140 7.64e-67 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva12g01669 Homeodomain 9.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01669 - - pvu:PHAVU_008G226100g 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01669 12 14115847 14116741 Bva12g01669 12 14115847 14116741 ECH