Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01668 ATGGATGTGATAAAGACGCAGCAAATCTCATCGAGACCCATCGAGAAGGTGATTGTTCATCCACTGTTATTGCTGAGCATCGTCGACAACTACAACAGGGTAGCTAAGGACACCCACAAACGCGTCGTTGGAGTCTTGCTTGGCAGTACTTTTAAATGCACCGTCGATGTCAGCAACAGCTACGCCGTGCCCTTTGAAGAGGATGACAAGGATCCGGGCATCTGGTTTCTGGACCACAATTATCATGAATCAATGTTTTCCATGTTTAAGAGAATAAACGCAAAGGAGCATGTCGTGGGATGGTATAGTACTGGTCCAAAACTGCGAGAAAATGACCTGGATATTCATGGGTTGTTTAATGACTACGCTCCCAATCCTGTCTTGGTTATAGTCGATGTTCAGCCTACAGAACTGGGAATTCCAACGAAAGCTTACTATGCAGTTGAAGAGGTTAAAGAGAACGCCACTCAGAAAAGCCAGAAGATCTTTGTCCATGTGCAATCAGAGATTGCTGCGCATGAAGTTGAGGAAATAGGGGTGGAGCACTTGCTTAGAGGTGTGAAGGATACAACCATTAGCACCCTTGCAACAGAGGTGAGTGCAAAACTCACAGCCTTGAAGGGTTTGGATGGAAGACTTAGAGAGATAAGGAGTTACCTTGACCTTGTTATTGACTACAAGCTTCCCTTAAACCATGAGATCCTGTACCACCTACAGAATGTCTTCAACCTTCTACCAAATCTCAATGTTGCTGATCTGATCAAGGCTTTTGCAGTGAAAACGAATGACATGATGCTGGTAGTATACCTATCGTCTCTAATCAGAAGTGTAATTGCACTGCACAACCTGATTAACAACAAGATGCTTAACAAAGAACATGAACGGGCAGAAGACTCAAAACCAGTGGAAGTTAAGGGGTTAGGGAAATgtagatg 935 0.4374 MDVIKTQQISSRPIEKVIVHPLLLLSIVDNYNRVAKDTHKRVVGVLLGSTFKCTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHGLFNDYAPNPVLVIVDVQPTELGIPTKAYYAVEEVKENATQKSQKIFVHVQSEIAAHEVEEIGVEHLLRGVKDTTISTLATEVSAKLTALKGLDGRLREIRSYLDLVIDYKLPLNHEILYHLQNVFNLLPNLNVADLIKAFAVKTNDMMLVVYLSSLIRSVIALHNLINNKMLNKEHERAEDSKPVEVKGLGKCR 311
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01668 311 CDD MPN_RPN7_8 15 295 IPR033858 GO:0005838
Bva12g01668 311 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 15 125 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bva12g01668 311 Gene3D Cytidine Deaminase, domain 2 9 194 - -
Bva12g01668 311 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7 1 305 - -
Bva12g01668 311 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 1 305 - -
Bva12g01668 311 Pfam Maintenance of mitochondrial structure and function 174 285 IPR024969 -
Bva12g01668 311 ProSiteProfiles MPN domain profile. 17 154 IPR037518 -
Bva12g01668 311 SMART pad1_6 16 150 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva12g01668 Bva-Chr12 14111663 14114950 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01668 19 248 Eukaryotic Initiation Factors Gene Family AT2G39990 27.778 2.89e-22 92.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01668 K03038 - gmx:100790393 563.148