Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01666 ATGCCTTCTTCTACGCCAACCCTTGTCTCTAAGTGCACTGTCTTTCCCGACCAAAAATCCTCCGTGCCAGACTTGAAGCTCTCCGTCTCCGACCTCCCCATGCTCTCCTGCCACTATATTCAAAAGGGCTGCCTCTTCAGTACTCTtccttctatttctttccacTCTCTTATCCCTCTCCTCAAGTCAGCTCTCTCTCGCACTCTCTCCCTCTTTCCCCCACTCGCTGGCCGCTTAACCACTGATTCCGACGGCTACGTCTACATAACCTGCAACGATGCAGGTGTGGATTTCCTCCATGTCAACGCTGCCGGAATCTGTATCCTTGACCTCTTAGTCCCGGGTGACGTCCCTCACTACTTCAAGGAATTCTTCACCTTCGACAGAAAGGTCAGCTATACTGGCCATTTCTCTCCAATTCTCGCCGTCCAGGTCACCGAGCTCTCTGATGGAGTCTTCATCGGTTGCTCCGTCAACCACGCCGTCACTGATGGCACATCCTTCTGGAATTTCTTCAACACCTTCGCCGAAGTCTGTAGAGGAgctaaaaatatatctaaggTACCGGACTTTCGCCGGAACTCTATCCTGATTTCTAAGGCAGTTCTCCGGATGCCGGAAGGTGGGCCACAAGTCACATTCAACGCCGACGAGCAGTTCCGCGAGAGAATTTTCAGCTTCAGCCGCGAAGCCATTCAGAAGCTGAAAGCTAGAACCAATAACCGAAAATGGGACTTAAACAGCGGCGTTAATGCAGCGGAGTTAATGGGGAAGCAGAGCAACGACCCTTATGAGAGCTGGCGCAAGACTGCAATTTCGAAACGTCAAGTAACAGAAACGGTGGAAATTTCGTCATTCCAGTCGTTATGTGCGTTACTATGGCGTGCTGTGACGCGTGCCAGGAAGCTACCATCTTCGAAAATGACAACATTCAGAATGGCAGTCAACTGTCGTCACAGGCTAGAGCCCAAACTGGATCCGTATTATTTCGGTAATGCCATACAGAGCATACCGACTTTCGCCTCAGCTGGTGACGTCCTCTCACGGGATTTGCACTGGTGCGCTGAACAGCTCAACGGCAACGTGAAGGCGCACAATGACGCTACGGTGCGACGCTTCGTAGAGGATTGGGAGAGTAACCCGAGGTGCTTCCCGCTAGGCAACTCCGACGGTGCATCAATCACCATGGGTAGTTCCCCTAGATTCCCAATGTATGATAACGACTTCGGATGGGGACGACCTTTGGCGGTTCGCAGTGGCTGGGCTAACAAATTCGACGGTAAGATTTCTGCCTTTCCGGGAAGAGATGGATCCGGGACAGTCGATTTGGAGGTCATTTTGGCGCCTGAAACCATGGCGGGTTTGGAGTCCGACCCAGAATTCATGCTATATGCATCAAGTTA 1403 0.5061 MPSSTPTLVSKCTVFPDQKSSVPDLKLSVSDLPMLSCHYIQKGCLFSTLPSISFHSLIPLLKSALSRTLSLFPPLAGRLTTDSDGYVYITCNDAGVDFLHVNAAGICILDLLVPGDVPHYFKEFFTFDRKVSYTGHFSPILAVQVTELSDGVFIGCSVNHAVTDGTSFWNFFNTFAEVCRGAKNISKVPDFRRNSILISKAVLRMPEGGPQVTFNADEQFRERIFSFSREAIQKLKARTNNRKWDLNSGVNAAELMGKQSNDPYESWRKTAISKRQVTETVEISSFQSLCALLWRAVTRARKLPSSKMTTFRMAVNCRHRLEPKLDPYYFGNAIQSIPTFASAGDVLSRDLHWCAEQLNGNVKAHNDATVRRFVEDWESNPRCFPLGNSDGASITMGSSPRFPMYDNDFGWGRPLAVRSGWANKFDGKISAFPGRDGSGTVDLEVILAPETMAGLESDPEFMLYASS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01666 467 Gene3D - 7 207 IPR023213 -
Bva12g01666 467 SUPERFAMILY CoA-dependent acyltransferases 58 181 - -
Bva12g01666 467 Pfam Transferase family 7 462 - -
Bva12g01666 467 Gene3D - 216 460 IPR023213 -
Bva12g01666 467 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 463 - -
Bva12g01666 467 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 6 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01666 Bva-Chr12 14105205 14106943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01666 60 456 Monolignol Biosynthesis Gene Families AT5G48930 26.824 5.72e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01666 - - gmx:100779616 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01666 12 14105205 14106943 Bva12g01666 12 14105205 14106943 ECH