Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01664 atgtctGACGCTTTGATCAATGGACTCGCCGGAGCTGGAGGAGGGATCATTGCTCAGCTGATCACTTATCCTCTTCAAACCGTAAACACTCGTCAGCAAACGGAGCGTGATCCgaagaaaagcaagaaaaatccTGGCACTCTTGAACAAATGTATCAGGTTGTAAAACATGAGGGATGGGAGCGGTTGTATGGAGGCTTAACGCCATCGCTAGTGGGTACAGCTGCCTCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGACTAAGGCTGAAATAGCTGCACtagaacaaaaaaggaaaggcaTTGGTGATGGATCAGTTGGTCTGTTGTCCTCACTAGTTGTTGCTGCTTTATCTGGGTGTGTTAATGTGCTGTTGACAAATCCCATATGGGTAGTGGTTACTCGCATGCAGACGCATAGAAAACAATCAAATAGAACTCTGCCTGGCAAAGGATTGTCAGTTGCTACGGAGCCAACGATTCTTTCTGCAGTTGAACCTCCTCCTTTTGGAACTAGCCATGCGATTCAAGAAGTCTATGGTGAAGCTGGATTTTGGGGTTTTTGGAAAGGTGTATTACCAACATTGATCATGGTAAGCAATCCTTCGATACAGTTCATGCTGTATGAAGCCATGCTGACGAAGTTAAAGAAAAGACGTGCTTTGAGCAAGAAGGGTAGCGATGGTATAACTGCTTTAGAGGTATTTCTTCTTGGAGCTTTGGCTAAGCTTGGGGCAACTATAGTAACTTATCCTCTTCTAGTGGTGAAGTCAAGGCTTCAAGCAAAGCAGGTTACAACTGAAGACAAGAGGCACCATTATAAAGGTACATGGGATGctattattaaaatgattcGCTATGAAGGGTTCTATGGATTTTACAAAGGTATGAGCACTAAAATTGTACAAAGTGTGCTGGCTGCTGCTGTTTTGTTTATGGTGAAGGAAGAACTAGTTAAGGGAACCCGTTTCTTGGTTTGGCACGTTTTGAGCAGTGCAGCTATTAACACGTTCAAGCCCAGCTACTATCTCCCTCGAGTGCTTCTCCGAGACAAAACTCACGAAGCCAGCTGCGAGAAAATGGCAGAGAAGAAATCAGAAACGCCAAGCAAAGGTCTAAAGAAGGCGAATCTCTTAGATCACCACTCCATCAAGCACATCCTTGACGAGTCTGTTTCCGAGataGTGAAGAGTCGTGGGTACGCCGAAGATGTGAGATTGAGCAACGTGAGGCTGTTTATGGGGACGATTATAATCGTCATTGCGCTGTTCGCTCAGTTCTACAAGAAGAAGTTCCCCGAGAACAGGGATTTTCTCATTGCCTGCATCGTCTTGTATATCGTGTTTAATGGATTGTTGCAGCTGATCATATACACTAAGGAGAAGAATGCCATTCTGTTTACCTATCCACCTGTGGGATCGTTCACCAGTACCGGTTTGGTTGTGTCTTCCAAGTTGCCTAGATTTTCTGACATGTACACGCTTACAATAGGAAGTGCTGATCCAAAATCAATTTCTGCAAATGAACCAGTGCATCTTACCAAGAGTGTAACTCAGTGGTTCACTAAGGATGGGGTTTTGGTAGGGGGTCTCTTCTGGAAAGATGTTGAAGCATTAATAGATCAATATACGAAGGAGCCAAAGAAGAGCAAGTG 1661 0.4275 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTERDPKKSKKNPGTLEQMYQVVKHEGWERLYGGLTPSLVGTAASQGVYYYFYQIFRTKAEIAALEQKRKGIGDGSVGLLSSLVVAALSGCVNVLLTNPIWVVVTRMQTHRKQSNRTLPGKGLSVATEPTILSAVEPPPFGTSHAIQEVYGEAGFWGFWKGVLPTLIMVSNPSIQFMLYEAMLTKLKKRRALSKKGSDGITALEVFLLGALAKLGATIVTYPLLVVKSRLQAKQVTTEDKRHHYKGTWDAIIKMIRYEGFYGFYKGMSTKIVQSVLAAAVLFMVKEELVKGTRFLVWHVLSSAAINTFKPSYYLPRVLLRDKTHEASCEKMAEKKSETPSKGLKKANLLDHHSIKHILDESVSEIVKSRGYAEDVRLSNVRLFMGTIIIVIALFAQFYKKKFPENRDFLIACIVLYIVFNGLLQLIIYTKEKNAILFTYPPVGSFTSTGLVVSSKLPRFSDMYTLTIGSADPKSISANEPVHLTKSVTQWFTKDGVLVGGLFWKDVEALIDQYTKEPKKSK 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01664 553 Pfam Microsomal signal peptidase 25 kDa subunit (SPC25) 386 542 IPR009582 GO:0005787|GO:0006465|GO:0016021
Bva12g01664 553 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 331 - -
Bva12g01664 553 Gene3D Mitochondrial carrier domain 5 326 IPR023395 -
Bva12g01664 553 Pfam Mitochondrial carrier protein 109 220 IPR018108 -
Bva12g01664 553 Pfam Mitochondrial carrier protein 233 321 IPR018108 -
Bva12g01664 553 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Bva12g01664 553 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Bva12g01664 553 SUPERFAMILY Mitochondrial carrier 3 319 IPR023395 -
Bva12g01664 553 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 323 IPR018108 -
Bva12g01664 553 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 217 IPR018108 -
Bva12g01664 553 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 331 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01664 Bva-Chr12 14084611 14094837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01664 24 333 Chloroplast and Mitochondria Gene Families AT2G47490 30.380 4.10e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01664 K13354 - gmx:100775784 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01664 12 14084611 14094837 Bva12g01664 12 14084611 14094837 ECH