Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01636 ATGCTACAAGAAGTTGCTGAGAGCGATGATGTGCCTAAGTTGGTACTCCACCACTACAAGAGAAGTTTCAATGGCTTCGTTGCAAAGCTAACAGAGGAAGAAGCCAAAAGAATGGCTGGACTTGATGGGGTGGTGTCTGTATTTCCCAGTAAAAAGAAGCATCCCCATACAACAAGGTCTTGGGATTTTCTTGGCTTTCCCCTACAAGTGCCAAGAGCAGGCACCGAAAGTGATGTCATCATTGGAGTAATTGACACTGGAATTTGGCCAGAACTTGAGAGCTTCAGTGATAAAGGACTTGGTCCGCCACCAAAAAAATGGAAGGGGACCTGCCAAAATGCTAATTTCACTTGCAATAAAAAAATCATCGGGGCAAAGTATTACAGAGCAGAAGAATTTTTATTCGAAGAATATCTGAAATCTCCACTAGATTCATATGGCCATGGGACTCATGTATCATCAACTGCAGCTGGAAACCCAGTTGAGCAGGCCAGCATGTTAGGCCTGGGACTGGGAACTGCAAGAGGAGCTGTTCCATCAGCACGCATTGCTGTCTATAAAGTGTGCTGGCTTGATGGTTGTTCTGATGCGGATATTCTAGCGGCTTTTGATGATGCAATTGCAGATGGGGTCGACATATTACAGGTGTCACTTGGAGGATCCGGTGGGAATTATTTCAGAGATGTAATAGCAGTTGGAGCATTTCATGCTATGAGACATGGAATATTGACAGTAACCTCAGCAGGAAACTCTGGTCCTCGTCCTGGATCCCTGTCAAACGTTTCACCTTGGTCTATTTCTGTGGCTGCTAGCACCATAGATAGGAAGTTTGTTACAAAGGTTGAATTGGGTAACAAGAAAGTGTATGAGggaatttcaataaatacatTTGACCTCAAGGGAAAGCTTTATCCTCTAGTCTATGGAGGAGATGTACCAAATACTACAAATGGCGATGATGGATCTATATCCAGGTTTTGTCTAAGTGATAGCTTGGACGGAAATTTGGTTAAGGGTAAAATTATTCTGTGTGATGCCAAAATCATAGGATATGGCCCCTTTGGAGCCAATGCTACCGGTTTCCTGTCACAAGGTCCATATTTCAGAGATGCTGCTGCCTCTTCTCCTTTGCCGGCATCCTACATCGACTTGCAGGACGGTGCTGCTGTTATTGACTACATAAACTCTACAAGGAAGCCGAGTGCAACCATATTTAAGAGTAATGAGGTAAAAGATACATCGGCCCCTTTTGTGGTCTCATTCTCCTCCAGGGGTCCAAATCATGTCACACCCGAAATTCTCAAGCCGGATTTGGTTGCTCCTGGAGTTGAGATTCTAGCCAGTTGGTCTCCAATATCCCCGGTATCCGAGGTTGATGGTGATAACAGAACATTAAAGTTCAACATAATCTCAGGAACATCAATGGCTTGCCCACATGTTTCTGGGGCAGCAGCATACGTTAAATCATTTCATCCTAAATGGTCTCCTGCCGCCATCCGGTCAGCCCTAATGACCACAGCTAAGCCACTGAGTCCCAAGAATAATCAAGACAAGGAGTTCGCATATGGTGCAGGACAAATTGACCCTGTCAAGGCTGTGAATCCTGGTTTAGTATATGATGCTGGTGAAGCTGACTACGTAAGATTTTTATGTGGACAGGGATATACTACGAGGGCTTTACAGCTTGTCACAGGAGATAAAAGTGTCTGTTCTGAAACGACTAAAACGACAGCGTTAGACCTAAACTACCCTTCCTTTGCTCTTCAAGTCCAATCCTCTAAACCTAGTATAAGTGCCAGTTTTAACAGGACAGTAACAAACGTTGGATCTACAGTATCTACTTACAATGCAACTATTACTGCTCCTCAAGGACTAAAGATTCAAGTGAACCCCAGTGTTCTGTCATTCACATCTCGAGGCCAGAACCAAACATTTGTACTATCTATTGAAGGAGAAATACAGGAAGCTATAGTATCAGCTTCTTTGGTTTGGAGTGATGGCAATGTCCTAGTGAGGAGCCCCATTGTTGTCTTTACTGCACCATA 2045 0.4377 MLQEVAESDDVPKLVLHHYKRSFNGFVAKLTEEEAKRMAGLDGVVSVFPSKKKHPHTTRSWDFLGFPLQVPRAGTESDVIIGVIDTGIWPELESFSDKGLGPPPKKWKGTCQNANFTCNKKIIGAKYYRAEEFLFEEYLKSPLDSYGHGTHVSSTAAGNPVEQASMLGLGLGTARGAVPSARIAVYKVCWLDGCSDADILAAFDDAIADGVDILQVSLGGSGGNYFRDVIAVGAFHAMRHGILTVTSAGNSGPRPGSLSNVSPWSISVAASTIDRKFVTKVELGNKKVYEGISINTFDLKGKLYPLVYGGDVPNTTNGDDGSISRFCLSDSLDGNLVKGKIILCDAKIIGYGPFGANATGFLSQGPYFRDAAASSPLPASYIDLQDGAAVIDYINSTRKPSATIFKSNEVKDTSAPFVVSFSSRGPNHVTPEILKPDLVAPGVEILASWSPISPVSEVDGDNRTLKFNIISGTSMACPHVSGAAAYVKSFHPKWSPAAIRSALMTTAKPLSPKNNQDKEFAYGAGQIDPVKAVNPGLVYDAGEADYVRFLCGQGYTTRALQLVTGDKSVCSETTKTTALDLNYPSFALQVQSSKPSISASFNRTVTNVGSTVSTYNATITAPQGLKIQVNPSVLSFTSRGQNQTFVLSIEGEIQEAIVSASLVWSDGNVLVRSPIVVFTAP 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01636 681 Pfam Fibronectin type-III domain 580 677 IPR041469 -
Bva12g01636 681 ProSiteProfiles Serine proteases, subtilase domain profile. 60 533 - -
Bva12g01636 681 ProSitePatterns Serine proteases, subtilase family, histidine active site. 148 158 IPR022398 -
Bva12g01636 681 SUPERFAMILY Subtilisin-like 55 537 IPR036852 GO:0004252|GO:0006508
Bva12g01636 681 CDD PA_subtilisin_like 281 404 - -
Bva12g01636 681 PRINTS Subtilisin serine protease family (S8) signature 144 157 IPR015500 -
Bva12g01636 681 PRINTS Subtilisin serine protease family (S8) signature 76 95 IPR015500 -
Bva12g01636 681 PRINTS Subtilisin serine protease family (S8) signature 471 487 IPR015500 -
Bva12g01636 681 Gene3D - 274 411 - -
Bva12g01636 681 ProSitePatterns Serine proteases, subtilase family, serine active site. 472 482 IPR023828 -
Bva12g01636 681 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 11 678 IPR045051 -
Bva12g01636 681 Gene3D - 550 679 - -
Bva12g01636 681 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 56 IPR037045 -
Bva12g01636 681 Pfam Subtilase family 77 525 IPR000209 GO:0006508|GO:0008236
Bva12g01636 681 Gene3D Peptidase S8/S53 domain 78 546 IPR036852 GO:0004252|GO:0006508
Bva12g01636 681 PANTHER PUTATIVE-RELATED 11 678 - -
Bva12g01636 681 CDD Peptidases_S8_3 53 507 IPR034197 -
Bva12g01636 681 Pfam Peptidase inhibitor I9 7 52 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01636 Bva-Chr12 13950648 13953467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01636 1 678 Subtilisin-like Serine Gene Family AT5G59100 48.555 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01636 - - gmx:100795826 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01636 12 13950648 13953467 Bva12g01636 12 13950648 13953467 ECH