Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01624 ATGGAAGAAGTGCAAGTGAGCCCTCCCCAACCCATGGAGATTAGGATCAAAGTCGTTTGCACCTCTCTCTGTCGCAGTGACCTTTCCGCTTGGGAAACTCAAAACATATTTCCTCGAATATTTGGCCATGAAGCATCAGGGATTGTAGAGAGCGTGGGGCAGGGAGTGACTGAATTTAAAGAGGGGAATCATGTGCTAACGGTCTTCATAGGAGAATGCATGACTTGCAGGCAGTGCAAGTCGGGTAAAAGTAACACTTGCCAAGCTTTGGGattggaaaggaaaggaaagTCCACTTTGGATGTGCTGTCAAAGTCAGTCCGAATGTACGTACCTCTTGAGAAGATATGCCTTCTGAGCTGTGGAGTTGCTGCAGGGTTTGTGGATGCATGTATATTGGCAGATTCTAGCATGTTGAATGGACAAAATGTCCTCTTCCAATA 443 0.447 MEEVQVSPPQPMEIRIKVVCTSLCRSDLSAWETQNIFPRIFGHEASGIVESVGQGVTEFKEGNHVLTVFIGECMTCRQCKSGKSNTCQALGLERKGKSTLDVLSKSVRMYVPLEKICLLSCGVAAGFVDACILADSSMLNGQNVLFQ 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01624 147 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 42 56 IPR002328 GO:0008270|GO:0016491
Bva12g01624 147 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 1 97 - -
Bva12g01624 147 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 106 134 - -
Bva12g01624 147 Gene3D - 1 140 - -
Bva12g01624 147 Pfam Alcohol dehydrogenase GroES-like domain 12 90 IPR013154 -
Bva12g01624 147 PANTHER ALCOHOL DEHYDROGENASE 1 97 - -
Bva12g01624 147 PANTHER ALCOHOL DEHYDROGENASE 106 134 - -
Bva12g01624 147 SUPERFAMILY GroES-like 1 131 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01624 Bva-Chr12 13881241 13882905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01624 13 99 Monolignol Biosynthesis Gene Families AT2G21890 32.967 3.03e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01624 K00001 - gmx:100819938 199.904