Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01618 ATGTTTCAAGAAGAAGGATCATCTTCCGTAACTTCATCACCTCTACAGTTCTTCTCGATGATGTCATTTTCACCTAGCCTAGGATCACCGTACCCGTGGCTTAGAGAACTTAAATCCGAGGAAAGGGGTTTGTACTTGATCCACTTATTGCTCACTTGTGCAAATCATGTAGCTGCCGGTAGTCTTGAGAATGCAAATGTTGCCCTTGAGCAAATTTCCCAGCTTGCCTCCCCTGATGGGGATACGATGCAGCGAATTGCTGCATATTTTGCCGAAGCACTTGCTGATAGGATACTAAAAACATGGTCTGGTCTTCACAAGGCCCTCAATTCTACTAGAATAGTTATGGTTTCTGAAGAAATTCTTGTCCAGAAACTGTTTTTTGAGTTATTCCCATTCTTGAAGGTAGCATTTGTGCTAACAAATCAGGCTATTGTTGAAGCAATGGAAGGGGAGAAGATGGTTCATATAATTGATCTCAATGCTGCTGAACCTGCGCAGTGGATTGCACTCCTGCAAGTGTTGAGTGCACGTCCTGAAGGCCCTCCACATTTGAGAATTACTGGGGTTCATCAACAGAAAGAGATTCTGGAGCAAATGGGACATAGACTCACTGAAGAAGCAGAGAAGTTGGATATTCCATTCCAATTCAATCCTGTGGTCAGCAAATTAGAGAACCTTGATTTTGATAAACTTCGCGTGAAAACTGGGGAGGCACTAGCAATCAGTTCTATTCTCCAACTGCATTCCCTTTTGGCCTTGGAGGATGAAGCCTTGAGGAGAAAATCTCCCCTCCTGTCAAAAAGTTCCAATGGAATTCATCTACAAAGAGTCCTGCCGATGAATCAAAACACATTGGGTGATTTGCTGGAGAAAGACATGGTTAATGGGTACAGCCCAAGTCCTGACTCAGCCTCATCATCACCAGCATCTATAAATGCTTCAATGAGTATGGAGGGCTTTCTCAATGCCTTGTGGGGTTTGTCACCAAAGGTCATGGTTGTCACAGAACAAGATTCGAATCATAACGGTTCAACTCTTATGGAGAGGCTGCTGGAAGCTTTGTATTCTTATGCCGCCCTATTCGATTGTTTGGAATCAACTGTCTCAAGAGCATCAATGGAGAGATTAAAGGTAGAGAAGATGCTTTTTGGCGAGGAAATCAAGAGCATTATAGCATGTGAGGGAgctgaaagaaaggaaagacaTGAAAAGCTAGAGAAGTGGCTCCAGAGGCTTGATTTAGCCGGGTTCGGGAATGTGCCTTTGAGCTATTATGGTATGTTGCAGGCAAGGAGGTTACTACAGAGCTATGGATGTGAAGGCTATAAGATGAGGGAGGAAAATGGTTCTGTAGTGATTTGCTGGCAGGATAGGACCCTGTTTTCTATATCAGCATGGAGATCTAGGAAGTA 1415 0.4311 MFQEEGSSSVTSSPLQFFSMMSFSPSLGSPYPWLRELKSEERGLYLIHLLLTCANHVAAGSLENANVALEQISQLASPDGDTMQRIAAYFAEALADRILKTWSGLHKALNSTRIVMVSEEILVQKLFFELFPFLKVAFVLTNQAIVEAMEGEKMVHIIDLNAAEPAQWIALLQVLSARPEGPPHLRITGVHQQKEILEQMGHRLTEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSILQLHSLLALEDEALRRKSPLLSKSSNGIHLQRVLPMNQNTLGDLLEKDMVNGYSPSPDSASSSPASINASMSMEGFLNALWGLSPKVMVVTEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRASMERLKVEKMLFGEEIKSIIACEGAERKERHEKLEKWLQRLDLAGFGNVPLSYYGMLQARRLLQSYGCEGYKMREENGSVVICWQDRTLFSISAWRSRK 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01618 471 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 470 IPR005202 -
Bva12g01618 471 PANTHER SCARECROW-LIKE PROTEIN 3 2 470 IPR030008 GO:0003700|GO:0005634|GO:0009739
Bva12g01618 471 ProSiteProfiles GRAS family profile. 37 468 IPR005202 -
Bva12g01618 471 Pfam GRAS domain family 46 468 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01618 Bva-Chr12 13835449 13836864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01618 1 471 GRAS Transcription Factor Family AT1G50420 69.647 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva12g01618 GRAS 5.9e-141 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01618 - - tcc:18589932 792.727