Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01611 ATGGAAATAGAAACTAGCAGTGGAGGCAATAGAGGCAGCAGAAATGGCGGCAGCGATTGGGCTGCTGCCGCCAAGAAAGCGGTGGCACACGGTGGCGATGATGGTCTCGAGAGGGGAAACTATTTGGTCTGGGAAGATCTAACAGTGGTCCTGCCAAACTTTGGCAAGGGACCAACTAAGAGGTTGCTCAATGGGCTCAATGGGTATGCTGAGCCTGGAAGAATCATGGCGATTATGGGTCCTTCTGGTTCTGGCAAATCCACCCTTCTGGATTCACTAGCAGGGAGATTGTCGAAAAATGTGGTCATGACTGGAAATATTCTTCTCaatgggaagaagaaaagaatggagATTGGTGCTGTAGCTTATGTAACTCAAGAGGATGTAATGCTTGGAACTCTCACTGTCAGGGAAAACATATCTTATTCAGCTCACCTACGTCTTCctactaaaatgaaaaaggaggAAATTACAGACATCATTGAGGGAACAATTATAGAAATGGGTCTCCAAGAGTGCGCGAATAGGTTGATTGGTAACTGGCATTTAAGAGGCATAAGTGGTGGGGAGAAGAAAAGAGTTAGTATTGCACTTGAAATCCTCACAAGGCCTCGCTTATTGTTTCTTGATGAACCAACCAGTGGCCTAGACAGTGCAGCAGCTTTCTTTGTTGTTCAAACTCTAAGAAATGTTGCTCGTGATGGAAGGACGGTTATCTCTTCAATTCATCAGCCGAGCAGTGAAGTTTTTGCTCTTTTTGATGACCTTTTCTTACTGTCTAGTGGTGAAACAGTTTATTTTGGAGAAGCAAAGATGGCTGTGGagTTCTTTGCTGAAGCAGGTTTCCCGTGCCCACGTAAACGCAATCCTTCTGACCACTTCCTACGATGTATCAATTCTGATTTTGACATTGTAACAGCCACATTGAAGGGATCTCAAAGAATTAGTGATGTTCCAAATTCATCAGATCCATTCATGAATTTGGCTACAGCAGAGATCAAAGCAATGCTTGTTGAGAAATATAGGCGTTCGGTGTATGCCAGAAGGGCCAAAGACAGAATCAAAGAACTTCGTTGCATTGAAGGACatgaaactaaaacaaaaaagggaaGTGGAGCAAGTTGGTGGAAGCAACTCAAGACACTGACAAAGAGATCATTTGTCAATATGTGTCGAGATATGGGTTACTACTGGTTGAGGATTATCATCTACATCGTTGTATCTATATGTGTTGgaactatttattttgatgttggCTATAGCTACACTTCGATCTTGGCACGCGGAGCTTGTGGTGCATTTATATCAGGATTTATGACATTTATGTCAATTGGAGGCTTTCCATCATTTATTGAGGAAATGAAGgttttttataaagaaaggCTTAATGGATATTATGGAGTTGCAGTATATATTCTTTCCAATTTCCTGTCTTCTCTCCCATTCTTGGTTGCCGTTGCTATCACTACTTCTAGCATTACTGTTCCAATGGTGAAATTCCGGCCGGGTTTCATTCATTATGTGTTCTTCACTCTCAACATCTTTGCCTGCATATCTGTAATAGAGAGCCTCATGATGGTTATAGCTTCACTTGTTCCAAATTTCCTCATGGGAATAATTACAGGAGCTGGAGTAATTGGAATAATGATGATGACCTCTGGATTCTTCAGGTTGCTGTCTGATCTTCCAAAGCCAGTTTGGCGCTACCCGATTTCTTTTATCAGTTATGGTTCCTGGGCAATACAGGGTGCCTACAAGAATGATTTGCTTGGGCTTGAGTTTGATCCTCTGATACCTGGTGACCACAAATTGACAGGAGAGTATATTATCACACACATGCTGGGAATAAAATTAGATCATTCAAAATGGTGGGACTTATCAGCTCTATTTGTCATTCTCATCTGCTACAGAACTCTATTCTTTATTGTTCTGAAATTCAAGGAGAGAGCTTCACCCTTGTTTCAGACAATTTATGCTAAGAGAACAATAGAAAAGCTTGAAAAGAGACCTTCTTTCAGGAAAATACCATCTTTCCCTTCAAAGAGGCATCAACCTCTCCACTCATTGTCTTCTCAAGAGGGTCTTAATTCTCCACTTCACTA 2102 0.3996 MEIETSSGGNRGSRNGGSDWAAAAKKAVAHGGDDGLERGNYLVWEDLTVVLPNFGKGPTKRLLNGLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNILLNGKKKRMEIGAVAYVTQEDVMLGTLTVRENISYSAHLRLPTKMKKEEITDIIEGTIIEMGLQECANRLIGNWHLRGISGGEKKRVSIALEILTRPRLLFLDEPTSGLDSAAAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSSGETVYFGEAKMAVEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRISDVPNSSDPFMNLATAEIKAMLVEKYRRSVYARRAKDRIKELRCIEGHETKTKKGSGASWWKQLKTLTKRSFVNMCRDMGYYWLRIIIYIVVSICVGTIYFDVGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYKERLNGYYGVAVYILSNFLSSLPFLVAVAITTSSITVPMVKFRPGFIHYVFFTLNIFACISVIESLMMVIASLVPNFLMGIITGAGVIGIMMMTSGFFRLLSDLPKPVWRYPISFISYGSWAIQGAYKNDLLGLEFDPLIPGDHKLTGEYIITHMLGIKLDHSKWWDLSALFVILICYRTLFFIVLKFKERASPLFQTIYAKRTIEKLEKRPSFRKIPSFPSKRHQPLHSLSSQEGLNSPLH 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01611 700 Gene3D - 35 281 IPR027417 -
Bva12g01611 700 PANTHER ABC TRANSPORTER G FAMILY MEMBER 12 36 695 - -
Bva12g01611 700 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 36 695 - -
Bva12g01611 700 Pfam ABC-2 type transporter 243 299 IPR043926 GO:0140359
Bva12g01611 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 275 IPR027417 -
Bva12g01611 700 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524
Bva12g01611 700 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 286 IPR003439 GO:0005524
Bva12g01611 700 MobiDBLite consensus disorder prediction 683 700 - -
Bva12g01611 700 SMART AAA_5 72 243 IPR003593 -
Bva12g01611 700 CDD ABCG_EPDR 41 268 - -
Bva12g01611 700 Pfam ABC transporter 63 214 IPR003439 GO:0005524
Bva12g01611 700 MobiDBLite consensus disorder prediction 674 700 - -
Bva12g01611 700 Pfam ABC-2 type transporter 378 587 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01611 Bva-Chr12 13762685 13768367 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01611 58 255 Calmodulin-binding Proteins AT2G36910 30.144 3.07e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01611 K05681 - gmx:100777598 1165.98