Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01610 ATGGAGAATCATGAAGCCACTTCCTTTAGCAATGATATCACAGATAGTGAGAACAGACTTCCAAAGGGGATGTATTTGGTGTGGGAAGATTTGAGTGTAGTTTTGCCAAATTTTGGCAAAGGAAGCACTAAAAGGTTGCTGGATGGATTAAGTGGATATGCTGAGCCTAGCAAGATCATGGCTATAATGGGTCCTTCTGGGTCTGGAAAATCCACTCTTCTTGATGCTTTAGCAGGGAGACTGGCTGGAAATGTTGTTATGACAGGAAATGTGCTTTTAAATGGAAAGAAGGGGAGACTAGACTATGGAGTTGTTGCATATGTGACCCAAGAAGACATATTGTTGGGAACACTAACTGTTAGAGAAACAATATCTTTCTCAGCTAATCTTAGGCTTCCAGCTTCCATGACCAAAGAAGAGATCAATGACTTCATAGAGGGAACAATTACTGAAATGGGTCTTCAAGATTGTGCTGATAGGCTTATTGGAAATTGGCACTTAAGGGGTATAAGTGGTGGGGAAAAGAAGAGACTAAGCATAGGACTTGAAATACTCACAAGGCCTCACCTCTTGTTTCTTGATGAACCTACCAGTGGTTTGGATAGTGCCTCAGCATTTTTTGTTGTTCAAACACTTAGAAATATAGCTCATGATGGAAGAACTGTTATCTCTTCCATTCATCAGCCAAGCAGTGAAGTTTTTGCACTTTTTGATgatctttttctcctttctggTGGTCACACAGTTTATTTTGGAGCTACCAAAAATGCAATTCAGTTCTTTGCCCAAGCAGGATTTCCATGTCCGAGTAGAAGAAATCCTTCAGATCATTTCCTTCGTCATATCAATTCGGATTTTGATGCTGTCATGATGACTATGATGGCCTCTAAGGGAATACCTGATCAAGAAGCATTGACAGATTCATTAATGAACTTAGAAACTgcacaaatcaaacaaatactCATCGAGAAATACCGACGATCAGAGTATGCAACTGCAGCAAGAGAAAGGATCAAAGAAATCACAAGTATTGAAGGACATGGGATTCAGTACAAAAATAAGAACCAAGCCAAATGGTGGAAGCAACTATCAACATTGACTCATAGATCTTTTGTGAACATGTCTAGAGACTTTGGATACTATTGGATAAGGATAGCAACATATATAGTCTTATCATTATGCATTGGAACTATCTTCTTCGACATCGGTTCAagttataattcaattttagcAAGAGGAGCTTGCGGTGCATTTCTATCGGGTTTCATGACATTCATGTCCATTGGAGGCTTCCCATCCTTGATTGAAGAACTTAAGGTCTTTTACAAAGAAAGGCTGAATGGGTATTATGGAATTCCTGTCTATATTCTATCAAACTTTCTCTCCTCCTTTCCATTTGTGGCAGTGATGTCTATTGCTACTGCAACTATAGCCTATTACATGGTGAAGTTTCGTCCTGAGTTTTCGCATTTTTTCTACATCTACCTTGATCTTTTCGCCTGCCTCGCAGTTGTTGAAAGCTCCATGATGATTATAGCTTCAATTGTTCCCAACTTCCTAATGGGAGTGATAATTGGAGCAGGATATATAGGTATTATGATGATGACTGCTGGCTATTTTCGTCTATTCCCAGACCTTCCCAAATTCTTCTGGCGTTACCCTATTTCATACCTTAATTATGGAGCATGGGGGTTGGAGGGAGCTTATAAGAATGACTTGATTGGGCTTGAGTTTGATCCTTCAGTACCTGGTGAACCCAAATTGAAAGGAGAAGTGATCCTCCAAACTGTTCTTGGGATTAAAGTTGAGTATTCAAAATGGTGGGACTTAGCTGCAGTTATAACCATCCTCATAGTGCTTAgagttgctttctttttcgttCTCAAATTCAAGGAGagagttttactttttcttcataaaatcTACACCAAGCAAACTTTGCAGCGTATAAAGAAGCGCCCTTCCTTCAGAAAAACATCATCGTTCCCTTCGAAGAGGCACCAAGCACTGCATCCATTGTCTTCTCAAGAGGGTCTCAATTCCCCACTTCATTA 2054 0.3822 MENHEATSFSNDITDSENRLPKGMYLVWEDLSVVLPNFGKGSTKRLLDGLSGYAEPSKIMAIMGPSGSGKSTLLDALAGRLAGNVVMTGNVLLNGKKGRLDYGVVAYVTQEDILLGTLTVRETISFSANLRLPASMTKEEINDFIEGTITEMGLQDCADRLIGNWHLRGISGGEKKRLSIGLEILTRPHLLFLDEPTSGLDSASAFFVVQTLRNIAHDGRTVISSIHQPSSEVFALFDDLFLLSGGHTVYFGATKNAIQFFAQAGFPCPSRRNPSDHFLRHINSDFDAVMMTMMASKGIPDQEALTDSLMNLETAQIKQILIEKYRRSEYATAARERIKEITSIEGHGIQYKNKNQAKWWKQLSTLTHRSFVNMSRDFGYYWIRIATYIVLSLCIGTIFFDIGSSYNSILARGACGAFLSGFMTFMSIGGFPSLIEELKVFYKERLNGYYGIPVYILSNFLSSFPFVAVMSIATATIAYYMVKFRPEFSHFFYIYLDLFACLAVVESSMMIIASIVPNFLMGVIIGAGYIGIMMMTAGYFRLFPDLPKFFWRYPISYLNYGAWGLEGAYKNDLIGLEFDPSVPGEPKLKGEVILQTVLGIKVEYSKWWDLAAVITILIVLRVAFFFVLKFKERVLLFLHKIYTKQTLQRIKKRPSFRKTSSFPSKRHQALHPLSSQEGLNSPLH 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01610 684 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 270 IPR003439 GO:0005524
Bva12g01610 684 SMART AAA_5 56 246 IPR003593 -
Bva12g01610 684 Pfam ABC transporter 47 198 IPR003439 GO:0005524
Bva12g01610 684 MobiDBLite consensus disorder prediction 653 684 - -
Bva12g01610 684 CDD ABCG_EPDR 23 252 - -
Bva12g01610 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 265 IPR027417 -
Bva12g01610 684 Pfam ABC-2 type transporter 362 571 IPR013525 GO:0016020|GO:0140359
Bva12g01610 684 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 22 679 - -
Bva12g01610 684 Gene3D - 16 265 IPR027417 -
Bva12g01610 684 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 22 679 - -
Bva12g01610 684 MobiDBLite consensus disorder prediction 661 684 - -
Bva12g01610 684 ProSitePatterns ABC transporters family signature. 170 184 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01610 Bva-Chr12 13749897 13755565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01610 58 241 Calmodulin-binding Proteins AT2G36910 30.882 5.86e-10 60.8