Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01600 ATGGAAGAAATTGGTGTATCTGTTGCGTCTGAGCTAGTAAAAACTCCGCTGCTTGCTGCTATTAGCCAAGTTCGATATTCAGTCTGTTTCAACAAGTATGTAGAAGaacttggaaaagaaaaggagaatttAATGGTAACAAGAGAAAGTGTGCAAGCACGTGCCGAAAAAGCCATACAAGAAGGTAAAAAGATTGATATCATGGTTGAGAAGTGGTTGAAAGATGCAAACACTATGATAGAAGAAGTGGAAAAGTTGGAGAAAAGAGTCAAGTCAAAAAATACATGTTGTTTTGGACGCTGTCCAAATTTGATTTGGCGATATCATGTTGGCAAGCAAGTATCTGAGAAAGCCAAAGTCATGTTTGAACtcaacaacaaaatcaacTTCCAAGAATTCGCACGCCCTGTTACACCTCCAGGCatggaatatttttcttctcaggGTTTTATGTACTTCAATAGTACGAAAGTTGCCTGGGATCAAGTTATGGAGGCATTGAAGGATGACAAGGTTTCCATGATTGGATTGTGGGGGATGGGGGGTTGTGGCAAAACCACCTTGGTGAAACAATTGGGTAAGGCAGTGGACaaagattttaataaagtGGTCTTTACTGTTGTGTCCAACACTGTGGATGTTCAAAAGATCCAAGGTGAAATTGCAAGCTCCCTAGATCTTAAATTGgagcaaaaagaaatattattagagAGAGCAAAGAGGCTGCGGCAGAGATtagttaaagaagaaaatattctgATAATTTTAGATGATATATGGaaaaagcttgattttgaagaaatagGGATTCCCTTTGGTGAAAATTGTAAAGGTTGCAAGATTCTCCTAACTACGAGACGTGCACAAGTATGCAATGTAATGGATTGTCAAAGAATAATTCCCTTGTCCCTTTTAACCAAAGAAGAATCATGGACTTTATTTCAAAGGTATGCTGGAATTACCAATCAGATGTCTGATTATATGAAGGGTTTGGCAAGAGATATTACAAAAGAATGTGGAGGATTGCCGGTGGCAATTGCAGCTGTGGCAAGTACTTTAAAGGGGAAGAAAAGTGAAAGTGAATGGAAGGAAGCTTTGGAAAAACTTAAGGAAGCTACACCAGTGGATATTGAGGAAGGCTTGCGAAATCCATATTCTTGTTTGCAGTTAAGTTATGATTTTCTCAAGAATGAAGAAGCCAAGTCACTGTTTTTACTATGCTCTGTATTTCcagaagattttgaaattcatgAAGAATATTTAGCAAGATATGGAATAGGACTCGGCTTATTTGGAAATGTCAGCTCTTACGAAAGAGCAAGGAACCAAGTGAGTGAAGCTAAGAATAAACTCCTAGATTCTTCTTTACTGCTAAAGGCTGAAAAAGATCAATGTGTCAAAATGCACGACTTAGTTCGAGATGTAGCCTTATGGatagcaaagaaaaagaataagaagatTGTGGGACCTGAAAGCAGTGGAAATGTGTTAGAAACAAATGAAACTTTTGAAGACAATACAATAAGGTATTTGTGGTGTGATGACCTGCAAAAACTTCCAAATATGTTAAGCTATCCCAAGCTTAAGTTTCTGTACATGGAAGTTTCAGATGattcaattttgtcaaatgattttttcaaaGGAATGGAAGAATTGAGAGTTGCAGTCCTTCGCTGTAAATTCTATAGAAGAAATCTAACGGTGGGAAAGTCAATCAAATGGCTAACAAATCTTCATTGTCTATTCCTTCAAAATTGGAACTCGGGCGatatctcttttctctcaagCTTGAAGACACTTGAGTCTCTTGTCTTGTGGAATTGTTCATTTCAGGAATTGCCAAATGAAATTATAGAGTTGAAGAAGTTGAGATTGCTAGATTTGTGTGGATGTGCAATCGAAAAGAATCCTTTTGAAGTGATTGGAAGATGTTCAAAACTAgaagaattatattttgtttacaatAAAGGTTCAGGATGGGAAAACGAAGGAAAAGTAGCTATTGCATTCTTGGATAAAAATAAGGCTGATTCAGGTTTGAAGAGGTATCGCATAGAAATAGGAACATCTTCTCTATTTGAGATAGAGGACTTTTCCATTACAAGGGGTTTATGTGTGAAAAATTTTGATGCTTCCACATCCAATGCAACATTTAAAGACTTGGCGCAAAAGGCAGAGGTTCTTAGACTGGATGTAAGTGAGAAAGGCTGGAAGAATGTCATACCTGACATGCTTGAAGCAACTGGAGGAGGTATGAATGAGTTGCTAGAATTTTTGCTGTACAATTCTAATGAGATAGAGTGCCTAGTTGACACTACTAATGCTGAAAATGTCTTCTccaagttagtcaagttggatatcTCATTTATGGAGCATTTTGAAACTTTGTGGCGTGGTCCACATGTAGGGATGGTGAATGCATTGAGCAGTCTTAAGGAGTTGGAATTGTATGAATGTCCAAAGTTGACGTCAGTCTTCACATGTGGAGTTGCTCAAAGTTTGGTATTATTGGAAAGACTGAAAATATTCTACTGTGACAGTTTGAAGCATATAATGACAGATGATCAAAAGATGAGGAGTACTATGTTAGTGTTCCCAAAGTTAAAAAGTGTGCGGATCTATCAATGCGATGAATTGGAATACTTGCTCTCTGTCTCTTTCGCACAGGGGCTTCTACAATTGGAAAATTTGAATGTATCTTATGCTAAAATGTTGAAACATGTGTTTGGTCAATCCTTATCCAATCATGAAGATCAGAATAAAAACACATTCCAAATCATTGACCTCCCTGTTCTCAACAATATCCAGCTTTATACGTTGCCAAACTTGATATCTGTGTGCCCAGAAAACTATTATCTTACGTGGCCATCATTGAAAGAGCTGTCTTGGAAATATTGTCCAAACTTAAAGATGATGTCTATCAATGAATGCATTATTGTGGATTCACAAGCAATCATACAAGAAGGAGACACTCCAAAAGAGgaaaaaaaattggggtCATTTGCTACCTATGACACCCCAATGATTGTTCAAACAACATGTTCACAAACTGTACAAAATTTGGAAAGAATTTTAGTTAAAGAGGGCAAAATGGAAGGCATTTTTCAACTACAGGAGATTCCCATAAATAGAGAGCTACAAGGATTGACatcatgtttaaaaattttgaaattgtatgATCTTAACGATTTGATATATATCTTCAAGGGCCCCAACAATTTTATCAGCCTTGAGAATCTCCAAACTCTAAAAGTGAAAAGAtgtggaaaattaaaatatatcttcTCTGCCAGTGTTATTGGAAGCCTGCCTCAATTGGAAGAGGtaagtattaaattttgtgaTGAATTAGAGCAAATAATTGAGATTGAAAAGCCTCAGTGTGCCACAGAAATTGATGCAGTGGATGATAATCCAAGGATTCCTTCAACTTCATGTTTTCCTCAAAAGTCAGGGTCAATTAATCTTTACAACTTGATCAACCTTTTTAAGTTCAAGGAAAGTGAGAGAAGTCACGAGAATAAGGACAAAGAAATAACTCATAACGATGATTGCCTACAAAGTTACATTTTAAAGTTTCCAAGATTGAGAAGGCTCAAGATTAATGGCTGCAATTCATTGGTATATATATTCCCTATCTCTATTGCTCAAGGACTCCAGAAGTTAGAAGAGATGGaaatatgtgaaaatgaaCAGCTAAAGCACATATTTAGTTGGagtaattatcaaaatttctcATCCCATCAATGTGAAAACAATCTCTCGATTGAGTTTCCTGTTTTGAAAGAAATCTATATCAAAGATTTACCAAATATTATAAGTGTTAGTCCggaaaattgttttcttaaatGCGCATCTTTGGAGAAGTTTTTTGTGAACCTCTCTTGGCTGCAAATCACATCTATGAATAAAGTGGTGATTGGcacaaaattaagattatgCAGGCATAATTTGGCATGGGAGTCGAAGGGGCTTGTGAAAGATGAGATCAAATTGAATGGAGAAGACGATGTCCTCCATAACCTAAGGCAGTTAAAGGAACTGAGGGTTTTGAATTGCCAAGTAGGTACAATTTTCCAACTGGAAGGACTTCCAATCAGTACTAGAGAAGAAAGCGGATTCATCTTTAGCTTAAATTACTTGAGATTGCACGAACTTTCTGAGCTAAGTTTTTTATGCAAGGGTCCAACACAATCTTTGGACCTTCAAAATCTCAAAGGGTTACATGTAGTTAAATGCAGAAGATTGAAAACTATCTTCTCATTGTCAATCTTGAGAAGCTTTCCACAGCTGGAGgacataacaataaaaaagtgtGATGAGTTGGAACAAGTcattgaagaagatgaaaaggaccGATATTCATCCAATTGTCAACATGAACAAGTGTGCTTCCCTAAGCTGACTCGTATTGTGATCAGGGAGTGCAACAACTTGAATTGTGTTTTTACTCTTGTCTCACCTCATGAGCTCCCAAAACTAAGGATGTTAGACATAGAAAAATGCTCTTTATTAGAGAATGTCTTTACACTTAAAGAAAGCAAGGCCGAAGATGGACATGCAAATATGCTTCCAAAGCTGAGGAAGACAAGGTTAAGCCAACTGCCAAGCCTCAGCAATGTCATTAATTTGCAATCTGTTAAAAATCAACAAGTAGAGCCAACTACGCTCCGTCGGCTGAGGCAATTAAGAAAACCGCCACAATGGGAGTTAGATTCCCTTATACGGGATGACGAGGAACCTTATGAAGATTATGTAATAGTGGAGAACTGTCCAAAACTGCCAATAAAATACGAAAACCCAGaaaGCAATGAAAATGCCgatgaaggagaagaagaagaagaaaacagcaGAAACAAGACAACGGAACCAATTTTCAACTCGCCAATGCATCTTGATGAAAATAAGGAGAATGGAATTGATCCTTCAGGAACTTCAATTGAAGAGACTACTCCACAAAATGCACCTGTTGTCAATTTTGGAAAGGGTGGAGACTCAACCCCAGAATTTGATACGTCAAGAAGTCTTGAAAATTCCTCCAAAGAAACATCCAAGACACCTGTTCAACAAGTTCTCACATCTGAAAAATATAACACAGTAACTTCATTTCTTgAAGGGAAAGATGCTgacttccaaacttcaacaaatcaaGAATATCAAACCTCAGgaaaagaaatacaagagGAATCAACATtagaagaaggaagaggatGGGAAGAAGAGCCCAAcggagaagaagaggaaaatacCCCATGCTTTCAACAGAGTAGAGTGATTGACAATGCACAAGCTTCAACTCCATCTATAGATGATAATTCCTTGTCAACTATTAAAACTACAAGCTCTCATGATGCCAATATAGTTCGAAAGAGCAGTGTTAACATTTCAAGTTCAAAGCAAGACAGAGATGTTACTCCCCAAACTTCACTGACTAAAGGTGTTATTCTGAATGAAGATCAAAGAAACAATATCAAGAATGGAAATGGTACTTCaggagCATCAATTTCATCTTCAGCAAGGCAAGACCCAACGCTAGAAGAAATAGTCAATTGTCATGGTCTATTCAAGGTTGATGCAAGACGTGCAGCATTACTGGAAGAGGCATTTTCCAAATATCCACACTTGTGGGAATGGCAAAAGAGGTTCCGCCCTAAGTATATTAAATGGGGCTATGAGTCTTTAGCTGACATGTTGCTGTTTCTAAAGTCAGAGACACCTAAGAAAATGGATAACTCAAAGAGGGAGGAATTTGAAAAACAATATGTCGAATTGGAATCTTTTGGCTTTAACAAAGAATGGTTGGCATCAATTCATCAAAGAGTGATGGAGGTGCAAGTTAACAAGGAGAAGCTCAAGCAATTGGAAGAGTTGGAATCACTAGAGAATGCCTTACAAGATGGACTAAATAATGTGAAGGCCATATTGACAACAGTCAgggattatttttcaaaatatgacACTGCATTTGACTTCTA 5975 0.3423 MEEIGVSVASELVKTPLLAAISQVRYSVCFNKYVEELGKEKENLMVTRESVQARAEKAIQEGKKIDIMVEKWLKDANTMIEEVEKLEKRVKSKNTCCFGRCPNLIWRYHVGKQVSEKAKVMFELNNKINFQEFARPVTPPGMEYFSSQGFMYFNSTKVAWDQVMEALKDDKVSMIGLWGMGGCGKTTLVKQLGKAVDKDFNKVVFTVVSNTVDVQKIQGEIASSLDLKLEQKEILLERAKRLRQRLVKEENILIILDDIWKKLDFEEIGIPFGENCKGCKILLTTRRAQVCNVMDCQRIIPLSLLTKEESWTLFQRYAGITNQMSDYMKGLARDITKECGGLPVAIAAVASTLKGKKSESEWKEALEKLKEATPVDIEEGLRNPYSCLQLSYDFLKNEEAKSLFLLCSVFPEDFEIHEEYLARYGIGLGLFGNVSSYERARNQVSEAKNKLLDSSLLLKAEKDQCVKMHDLVRDVALWIAKKKNKKIVGPESSGNVLETNETFEDNTIRYLWCDDLQKLPNMLSYPKLKFLYMEVSDDSILSNDFFKGMEELRVAVLRCKFYRRNLTVGKSIKWLTNLHCLFLQNWNSGDISFLSSLKTLESLVLWNCSFQELPNEIIELKKLRLLDLCGCAIEKNPFEVIGRCSKLEELYFVYNKGSGWENEGKVAIAFLDKNKADSGLKRYRIEIGTSSLFEIEDFSITRGLCVKNFDASTSNATFKDLAQKAEVLRLDVSEKGWKNVIPDMLEATGGGMNELLEFLLYNSNEIECLVDTTNAENVFSKLVKLDISFMEHFETLWRGPHVGMVNALSSLKELELYECPKLTSVFTCGVAQSLVLLERLKIFYCDSLKHIMTDDQKMRSTMLVFPKLKSVRIYQCDELEYLLSVSFAQGLLQLENLNVSYAKMLKHVFGQSLSNHEDQNKNTFQIIDLPVLNNIQLYTLPNLISVCPENYYLTWPSLKELSWKYCPNLKMMSINECIIVDSQAIIQEGDTPKEEKKLGSFATYDTPMIVQTTCSQTVQNLERILVKEGKMEGIFQLQEIPINRELQGLTSCLKILKLYDLNDLIYIFKGPNNFISLENLQTLKVKRCGKLKYIFSASVIGSLPQLEEVSIKFCDELEQIIEIEKPQCATEIDAVDDNPRIPSTSCFPQKSGSINLYNLINLFKFKESERSHENKDKEITHNDDCLQSYILKFPRLRRLKINGCNSLVYIFPISIAQGLQKLEEMEICENEQLKHIFSWSNYQNFSSHQCENNLSIEFPVLKEIYIKDLPNIISVSPENCFLKCASLEKFFVNLSWLQITSMNKVVIGTKLRLCRHNLAWESKGLVKDEIKLNGEDDVLHNLRQLKELRVLNCQVGTIFQLEGLPISTREESGFIFSLNYLRLHELSELSFLCKGPTQSLDLQNLKGLHVVKCRRLKTIFSLSILRSFPQLEDITIKKCDELEQVIEEDEKDRYSSNCQHEQVCFPKLTRIVIRECNNLNCVFTLVSPHELPKLRMLDIEKCSLLENVFTLKESKAEDGHANMLPKLRKTRLSQLPSLSNVINLQSVKNQQVEPTTLRRLRQLRKPPQWELDSLIRDDEEPYEDYVIVENCPKLPIKYENPESNENADEGEEEEENSRNKTTEPIFNSPMHLDENKENGIDPSGTSIEETTPQNAPVVNFGKGGDSTPEFDTSRSLENSSKETSKTPVQQVLTSEKYNTVTSFLEGKDADFQTSTNQEYQTSGKEIQEESTLEEGRGWEEEPNGEEEENTPCFQQSRVIDNAQASTPSIDDNSLSTIKTTSSHDANIVRKSSVNISSSKQDRDVTPQTSLTKGVILNEDQRNNIKNGNGTSGASISSSARQDPTLEEIVNCHGLFKVDARRAALLEEAFSKYPHLWEWQKRFRPKYIKWGYESLADMLLFLKSETPKKMDNSKREEFEKQYVELESFGFNKEWLASIHQRVMEVQVNKEKLKQLEELESLENALQDGLNNVKAILTTVRDYFSKYDTAFDF 1991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01600 1991 PANTHER - 1461 1558 - -
Bva12g01600 1991 PANTHER - 7 1126 - -
Bva12g01600 1991 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 7 1126 - -
Bva12g01600 1991 MobiDBLite consensus disorder prediction 1789 1841 - -
Bva12g01600 1991 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1461 1558 - -
Bva12g01600 1991 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1150 1456 - -
Bva12g01600 1991 Pfam NB-ARC domain 161 393 IPR002182 GO:0043531
Bva12g01600 1991 MobiDBLite consensus disorder prediction 1708 1752 - -
Bva12g01600 1991 Coils Coil 34 61 - -
Bva12g01600 1991 SMART AAA_5 171 304 IPR003593 -
Bva12g01600 1991 Gene3D - 148 300 IPR027417 -
Bva12g01600 1991 Coils Coil 222 252 - -
Bva12g01600 1991 MobiDBLite consensus disorder prediction 1596 1688 - -
Bva12g01600 1991 Coils Coil 1943 1970 - -
Bva12g01600 1991 MobiDBLite consensus disorder prediction 1708 1726 - -
Bva12g01600 1991 MobiDBLite consensus disorder prediction 1639 1657 - -
Bva12g01600 1991 Gene3D Ribonuclease Inhibitor 729 988 IPR032675 -
Bva12g01600 1991 Gene3D Ribonuclease Inhibitor 1331 1518 IPR032675 -
Bva12g01600 1991 SUPERFAMILY RNI-like 1049 1510 - -
Bva12g01600 1991 Gene3D - 389 477 IPR036388 -
Bva12g01600 1991 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 407 IPR027417 -
Bva12g01600 1991 PANTHER - 1150 1456 - -
Bva12g01600 1991 Gene3D Ribonuclease Inhibitor 485 674 IPR032675 -
Bva12g01600 1991 Coils Coil 69 93 - -
Bva12g01600 1991 PRINTS Disease resistance protein signature 806 822 - -
Bva12g01600 1991 PRINTS Disease resistance protein signature 246 260 - -
Bva12g01600 1991 PRINTS Disease resistance protein signature 339 353 - -
Bva12g01600 1991 PRINTS Disease resistance protein signature 174 189 - -
Bva12g01600 1991 Gene3D - 304 388 IPR042197 -
Bva12g01600 1991 Gene3D Ribonuclease Inhibitor 1018 1241 IPR032675 -
Bva12g01600 1991 MobiDBLite consensus disorder prediction 1666 1688 - -
Bva12g01600 1991 CDD AAA 177 285 - -
Bva12g01600 1991 SUPERFAMILY L domain-like 510 880 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01600 Bva-Chr12 13665610 13674289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01600 172 486 WRKY Transcription Factor Family AT5G45050 23.765 1.09e-14 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01600 - - lang:109340689 1182.93