Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01586 ATGTCAAGAATGCCTTGGCTCCttagaaaattcaaagtttcaaTACACTCGTCTTTCATAGATCACCTAGCTTGCAACGGATTGCTGTTACTATTTGTGCGCACGTCAGGTTATCATTTACGAAGTATTTATCCAAATGAATTAGGAAATCTAGAAAATGAGTGGGAATTCGAGGAAAACCTTGAGAGCATCACAATTGATCCATTTTATGAAGCTCATGTAGACCCAGTTAGTTTTGCTCCTCAAACATGGGTCAATTCAAATGTAGATGGGATTATTCCATACTGGAGTGTGAGCCCTGCTGAAGTTTCTTTAGATGTGCCATCTATTCCTACCGTTTCAGCAGCTGATTCTTCCCTGGAAAACAATGACTTTCCCGAAACTGTCAATTTCATGAGCCAAATTCTTATGGAAGAGAACCTTGATCAGAAGCAACCCATCATTTTTTATCCATTAAGCCTGCAAGTCactgagaaatcattttaTGATGCTCTTAAAGAAAACCATACTTCTTTCCCCAATGATTTCCCCCTTGACATGTATCAAAAAGTAGAGAGCCCGGATGTTGATGGATCTGGCAGTAATAACAGTAGCAGCAACCCAGTAGATGTTTCATGCCAAGGCAATCCTTATGATGCCAAAGTCTCTTCATCAGACACCCCTACTTCATACGATCATGCTTTTCAGTTGAGTTCGGGAATCATCTCTCAAAATCCATCCCAACCTCCAAATGCTTTAACTAATACTGGTGACGAAACGATGGGCGTGGGTTCTTCCATTAATGAAACCTTGGCACAAAATATCTTCAGTAATGCAGAATCTGTTTTGCAGTTTAAGAGAGGATTGGAGGAAGGTAGCAAGTTTCTTCCTAAAGGTACTCAACTCACCACTGGTCTGGAGAATAACTCATTGGCTCGTGAGCTGAATGGTAAGGCCACAAAGAAAGTATTCAGTATGGAGAAAGATGTTAGGGAGAGTTCACACAGGTTAAATGGTAGAAAGAATCATGATCGTGAAGGTATTGAAccagaagaaggaagaagtaACAAGCAGTTAGCAGCGTATGTTGATGAGAGTGAACTAACAGAGATGTTTGATCGAGTGTTGCTTAGTATTGGGAATGTTCCTCTATGTGATGAACATGGAGGCTTGCAGAATGGATCAGTTAAAATGGCGCAGCCAAATTCATCTGATGGAGGGAAAACTCGCTCTAAGAAAAGAGGCAACAAGAAGGAAACTGTGGATTTCAGGACTCTTCTGATTCTATGTGCACAAGCTGTATCTGGTAATGACAACAGGACTGCTAATGAACTACTGAAGCAGATTAGGCAGCATTCTTCTCCCATTGGCGATGCATCACAGAGATTGGCTCATTACTTCGCTAATGGTCTTGAGGCACGCTTAGTTGGTGCTCGTACGACTGGAACCCAAACACTTCTTATCTCTCTGTTCTCCAAGAGGATCTCTACTGCTGATTTTTTGAAGGCTAACCAAGTTATCTTTAATGCCTGTCCTTTCAAGTTTGCCCActtcttttcatataaaataattctgaaAGCAGCCGAAAAGTCAAAAAGCCTTCATATTGTtgattttggtatttcatATGGTTTTCAGTGGCCTatgctaattaaatttttgtcagAGAGAAGCAATGGACCTCCCAAGCTACGCATCACAGGCATAGAATTTCCCCAATCTGGCTTCCGTCCAACAGAGAGAATTGAGGAGACTGGTCGTCTCCTAGCGAACTATTGCAAGCGGTTCAATGTCCCATTTGAGTTCAAAGCCATAGCTTCACAGAAATGGGAAACCATtcaaattgaagaatttaatATTGACAGCAATGAGCTGCTTGTTGTGAACGAACTGATGAGGTTTAAGACTTTTCTTGATGACACAGTTGAAGTAAACAATCCAAAGAATGCGGTTCTGAAATTAATCAAGATGATAAATCCCAATATTTATGTTCAAACCATTATTAATGGAGCCTTCAATTCCCCTTTCTTCCTCACACGGTTCAGGGAGGCATTGTTCCATTTTTCTGCAATTTATGATATGTTTGACACTCTAATACCCCGTGAAGACAAATGGAGATTGATGATTGAGAGAGAGTTTCTTGGGCGGGACGCTTTGAATGTTATAGCATGTGAAGGTTTACAGAGGGTTGTGAGACCTGAGACATACAAACAATGGCAAGTTAGAATTGCAAGAATTGGTTTCAGGCAGCTCCCACTGGATAAGGAACTAATGGATAAATTCCGGGGAAAGTTGAAGGCATGCATAATTTGGTGCTACTGGGAGCATGGAGGACTTATAGTGGAGAATATCTTCTGGTATCAAGTTCACTTGACAGGTTGGATGTTGATGATCAGCTGCTGCACACTAACGAGGCTATCACTGTgTTTAAGACAAGTTGCTCCTGTGAACCATTACTCCGATTTCGGTTTCTTGAACCTTTGTTTTGCAAATGAAGGTTTTTGGCATAACGTACGTGTAGCCAGCCGCCTTGGCTCCTTAGAAAATTCAAGGTCTTTCATCGATCACCTAGCTGGCAACGGATTGCTGCTATTCTTTGTGGACAAGTTATCATTTACGAAGGATTTGTATGTTGATCCAAATGACTTAAGATATCTAGAAAATGAGTGGGAATTCGAGGAAAGCCTTGATAGTATCACAATTGATCCATTTTATGAAGCTGATGTAGACCCAGTTAGTTTTGCTCCTCAAACATGGGTCAATTCTGATGTAGATGAGATTGTTCCATTCTGGAATGTGAGCCCTGCTGAAGTTGCTTTAGATGTGCCATCTATTCCTGTGGCTTCAGCAGCTGATTCTTCCCTGGAAAACAATGACTTTTCTGAAACTGTCAAGAATATGAGCCAAATTCTTATGGAAGAGAGCCCTGATCAGAAACAGTCCATCTCTTTTGATCCATTAAGCCTGCAagctactgagaaatcattttaTGATGCTCTTAAAGAAAACCATACTTCTTCTCCCAATGAGCACCCCCTTGATATGTATCAAAATGTAGAGAGCCCAGATGTAGATGGATCTGGCAGTAACTCCAGCAGCAGCAACCCAGTAGATGTTTCATGCCGAGGCAATCCTTGTGATGTTAAACTTTCTTCATCAGAAACCCCTACTTTAAGTGATCATGCTTTTCAGTTTAATTCAGGAACCATTTCTCAAAAGCCATCTCAACCTCCAAATGCTTTAACTAATATTGTTGATGGAATGATGGGTGCGGGTTCTTCCATTAATGAAACCTTGGCACAAAATATCTTTAGTAGTGCAGAATCTGTTTTGCAGTTTAGGAGAGGATTGGAGGAAGGTAGGAAGTTCCTTCCTAAGGGTACTCAACTTACCACTGGTCTGGAGAATAATTCATTGTCTCTTGAGCTGAACGGAAAGGCCAGAAAGGAAGTATTCAATATGGAAAAAGATGTTAGGGAGAGTTCGCACAGGTTAAATGGTAGAAAAAATCATGATCGCGAAGGTATTGAACCAGAAGAAGGGAGAAGTAACAAGCAGTTAGCAGTGTATGTTGATGAGAGTGAACTAACAGAGATATTTGATCAAGTGTTGCTTGCTATTGGGAATTGTCATCTATGTAATGAACATGAAGGCTTGCAGAATGGATCAGCTAAAGTGACGCAGCCAAATTCATCTGATGGAGGGAAAACTCGCACTAAAAAGAGAGGCAACAAGAAGGAAACTGTGGATTTGAGGACTCTTCTGATTCTATGCGCACAAGCTGTGTCTGGTAATGACAACAGGACTGCTAATGAGCTACTGAAGCAGATTAGGCAGCATTCTTCCCCACTTGGTGATGCATCACAGAGGTTGGCTCATTACTTCGCTAATGGTCTTGAGGAACGCTTAGTTGGTGCTACTGGAACCCAAAAACTTTCtgtctctcttttctccaAGAGGATCTCTACTGCTGATTCTTTGAAGGctcaacaaattatttttaatgccTGTCCTTTCAAGAGGTTTGCCCATtacttttcatataaaatgattCTGAAAGCAGCAGAAAAGTCAAAAAGCCTTCATATCATtgattttggtatttcatATGGTTTCCAGTGGCCGAtgcttattaaatttttgtcagAGAGAAGCAGTGGACCTCCCAAGCTACGCATCACAGGCATAGACTATCCCCAAACTGGCTTCCGTCCAGCAGAGAGAATTGAGGAGACTGGTCGTCTCCTTGCAAACTATTGCAAGCGGTTCAATGTCCCATTTGAGTTCAAAGCCATAGCTTCACAGAAATGGGAAACCATtcaaattgaagaatttaatATTGACAGCAATGAGCTGCTTGTTGTGAACGACTTGATGAGGTTCAAGAGTTTGCTTGATGACACAATTGAAGTGAACAATCCAAGGAATGCAGTTCTGAATTTAGTCAAGATGatgaatccaaatatttttgttcaaactGTTGTTAATGGAGCCTACAATTCCCCTTTCTTTCTCACGCGGTTCAGGGAGGCATTGTTCCATTTTTCCGCAATGTATGATATATTTGACACTCTAGTACCCCGTGAAGACGAATGGAGATTGATGACTGAGAGAGAGCTTCTTGGACGGGAGGCTTTGAATGTTGTAGCATGTGAAGGTTTTGAGAGGATTGTGAGGCCCGAGACATACAAGCAATGGCAGGTTAGGAATACAAGGATTGGTTTCAGGCAGCTCCCACTGGATAAGGAGCTAATGGACAAGTTCCGGCGAAAGTTCAAGTCATGGTACCACAGAGATTTCATCATTGATGAAGACAATAATTGGATGCTTCAGGGATGGAAGGGTCGCATTTTGTATGCATCCACTTGTTGGGTGCCAGCATA 4862 0.3963 MSRMPWLLRKFKVSIHSSFIDHLACNGLLLLFVRTSGYHLRSIYPNELGNLENEWEFEENLESITIDPFYEAHVDPVSFAPQTWVNSNVDGIIPYWSVSPAEVSLDVPSIPTVSAADSSLENNDFPETVNFMSQILMEENLDQKQPIIFYPLSLQVTEKSFYDALKENHTSFPNDFPLDMYQKVESPDVDGSGSNNSSSNPVDVSCQGNPYDAKVSSSDTPTSYDHAFQLSSGIISQNPSQPPNALTNTGDETMGVGSSINETLAQNIFSNAESVLQFKRGLEEGSKFLPKGTQLTTGLENNSLARELNGKATKKVFSMEKDVRESSHRLNGRKNHDREGIEPEEGRSNKQLAAYVDESELTEMFDRVLLSIGNVPLCDEHGGLQNGSVKMAQPNSSDGGKTRSKKRGNKKETVDFRTLLILCAQAVSGNDNRTANELLKQIRQHSSPIGDASQRLAHYFANGLEARLVGARTTGTQTLLISLFSKRISTADFLKANQVIFNACPFKFAHFFSYKIILKAAEKSKSLHIVDFGISYGFQWPMLIKFLSERSNGPPKLRITGIEFPQSGFRPTERIEETGRLLANYCKRFNVPFEFKAIASQKWETIQIEEFNIDSNELLVVNELMRFKTFLDDTVEVNNPKNAVLKLIKMINPNIYVQTIINGAFNSPFFLTRFREALFHFSAIYDMFDTLIPREDKWRLMIEREFLGRDALNVIACEGLQRVVRPETYKQWQVRIARIGFRQLPLDKELMDKFRGKLKACIIWCYWEHGGLIVENIFWYQVHLTGWMLMISCCTLTRLSLCLRQVAPVNHYSDFGFLNLCFANEGFWHNVRVASRLGSLENSRSFIDHLAGNGLLLFFVDKLSFTKDLYVDPNDLRYLENEWEFEESLDSITIDPFYEADVDPVSFAPQTWVNSDVDEIVPFWNVSPAEVALDVPSIPVASAADSSLENNDFSETVKNMSQILMEESPDQKQSISFDPLSLQATEKSFYDALKENHTSSPNEHPLDMYQNVESPDVDGSGSNSSSSNPVDVSCRGNPCDVKLSSSETPTLSDHAFQFNSGTISQKPSQPPNALTNIVDGMMGAGSSINETLAQNIFSSAESVLQFRRGLEEGRKFLPKGTQLTTGLENNSLSLELNGKARKEVFNMEKDVRESSHRLNGRKNHDREGIEPEEGRSNKQLAVYVDESELTEIFDQVLLAIGNCHLCNEHEGLQNGSAKVTQPNSSDGGKTRTKKRGNKKETVDLRTLLILCAQAVSGNDNRTANELLKQIRQHSSPLGDASQRLAHYFANGLEERLVGATGTQKLSVSLFSKRISTADSLKAQQIIFNACPFKRFAHYFSYKMILKAAEKSKSLHIIDFGISYGFQWPMLIKFLSERSSGPPKLRITGIDYPQTGFRPAERIEETGRLLANYCKRFNVPFEFKAIASQKWETIQIEEFNIDSNELLVVNDLMRFKSLLDDTIEVNNPRNAVLNLVKMMNPNIFVQTVVNGAYNSPFFLTRFREALFHFSAMYDIFDTLVPREDEWRLMTERELLGREALNVVACEGFERIVRPETYKQWQVRNTRIGFRQLPLDKELMDKFRRKFKSWYHRDFIIDEDNNWMLQGWKGRILYASTCWVPA 1620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01586 1620 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 942 1619 IPR005202 -
Bva12g01586 1620 MobiDBLite consensus disorder prediction 320 350 - -
Bva12g01586 1620 MobiDBLite consensus disorder prediction 176 222 - -
Bva12g01586 1620 Pfam GRAS domain family 417 761 IPR005202 -
Bva12g01586 1620 Pfam GRAS domain family 1244 1617 IPR005202 -
Bva12g01586 1620 PANTHER SCARECROW-LIKE PROTEIN 34 95 761 - -
Bva12g01586 1620 PANTHER SCARECROW-LIKE PROTEIN 34 942 1619 - -
Bva12g01586 1620 MobiDBLite consensus disorder prediction 384 409 - -
Bva12g01586 1620 ProSiteProfiles GRAS family profile. 407 799 IPR005202 -
Bva12g01586 1620 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 95 761 IPR005202 -
Bva12g01586 1620 MobiDBLite consensus disorder prediction 188 222 - -
Bva12g01586 1620 MobiDBLite consensus disorder prediction 1151 1174 - -
Bva12g01586 1620 MobiDBLite consensus disorder prediction 995 1033 - -
Bva12g01586 1620 MobiDBLite consensus disorder prediction 1015 1033 - -
Bva12g01586 1620 MobiDBLite consensus disorder prediction 1214 1237 - -
Bva12g01586 1620 ProSiteProfiles GRAS family profile. 1235 1618 IPR005202 -
Bva12g01586 1620 MobiDBLite consensus disorder prediction 320 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01586 Bva-Chr12 13584048 13592931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01586 128 759 GRAS Transcription Factor Family AT1G07530 47.032 2.44e-177 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva12g01586 GRAS 1.7e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01586 - - rcn:112163987 1241.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01586 12 13584048 13592931 Bva12g01586 12 13584048 13592931 ECH