Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01583 ATGGAGCAAGATTCCAAGAAAGTTTCACTCTCTACAAAGTCAGGTTTGCTGCAGAGTGAAAACTTGTACAAGTATATCCTAGAGACCAGTGTATACCCACGTGAACCAGAGCCTCTCAGGGAACTGAGAGAGGTCACAGCTAGCCACCCAAGGGCAACAATGGCTACTGCACCAGATGCAGGGCAGCTAATTGCATTGCTTCTGCAGCTGCTAAATGCGAAAAAGACTATTGAAGTTGGAGTCTTCACGGGATACTCCCTTCTCCTCACTGCTCTTTCAATTCCTGAGGATGGCAAGATAACAGCAATAGACTTAAATCGCAATGCATATGAGATTGGATTACCAATAATTAGAAAAGCTGGTGTTGAGCATAAGATTGACTTCATTGAATCTGAAGCTTTGCCAGTTCTGGATCGGCTCTCAAAAGAAATTGGCAATGAAGGGAGTTTTGACTTTGCATATGTTGATGCTGATAAAGTTAACTACTGGAATTATCATGAAAGAATCATAAAACTGTTGAAGGTGGGTGGAATAGTTGTTTATGATAACACTCTATGGGGAGGATCAGTGGCAATGAGTGAGCAGGAAACTGAAGGATACATGAAACAAGGCAGGCAACTGACCATTGAGTTCAACAAATTACTTGCAGCTGATCCTCGAGTTCAAATTTCACAGGCTCCATTGGGTGATGGCATCACCATATGCAAGCGTTTATTTTG 719 0.4242 MEQDSKKVSLSTKSGLLQSENLYKYILETSVYPREPEPLRELREVTASHPRATMATAPDAGQLIALLLQLLNAKKTIEVGVFTGYSLLLTALSIPEDGKITAIDLNRNAYEIGLPIIRKAGVEHKIDFIESEALPVLDRLSKEIGNEGSFDFAYVDADKVNYWNYHERIIKLLKVGGIVVYDNTLWGGSVAMSEQETEGYMKQGRQLTIEFNKLLAADPRVQISQAPLGDGITICKRLF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01583 239 Gene3D Vaccinia Virus protein VP39 6 239 IPR029063 -
Bva12g01583 239 PANTHER O-METHYLTRANSFERASE-RELATED 10 238 - -
Bva12g01583 239 Pfam O-methyltransferase 28 238 IPR002935 GO:0008171
Bva12g01583 239 CDD AdoMet_MTases 77 181 - -
Bva12g01583 239 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 15 238 IPR002935 GO:0008171
Bva12g01583 239 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 10 238 - -
Bva12g01583 239 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 19 237 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01583 Bva-Chr12 13569442 13572582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01583 15 239 Monolignol Biosynthesis Gene Families AT4G26220 72.444 6.42e-123 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01583 K00588 - rcu:8265096 347.436