Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01582 ATGGAGACCACTATTTATGCTATTGAAATGGGTAGCACCGCTGATGGGGATGAAGAGCAACATGGTGGTGGTGGTCCTGAAAATGCACTTCAATTCATCAGTGGcTATAGAGCTAAACTACTCAATTGTAGTAAGTTATTTCCAAACCAGATAGCGACAGGAATAGCAGAGAAAGCTAACACTGAAAGACGACAAAGTGATTTTGGATTTATCGATGCACCCAAACGTAATCAAGTTGAGCAGGTCAACCAATGCAAAATCAGCAAGCTGAAGTGGCTCGATGTTCTTTtgaacaaaactttttttgatTTGTGTGAAAGTCATCCTGTTCGTAGGAACGAGTTAAACAGGTACTGTGTAAATTGCAAGGTCTCAGCTTGCCAATATTGTGTATCTTCTGGTGCTCATCGCCATCACAagatacttaaaatttatagacaTGTCTACAAAGATGTGGTCTCGCTTGGTGCTATTGAAAAGCATATTGATTGTTCAGAAATTCAGCCCTACAAGTGCAACAAGCGATTGATTATAGCTCTGAATCCTCTCCCACACTCTGGTTCCACATCAAAGAGTGAGACTTCATGTGAGATCTGTGGGAGGAGGTTGACTGATCCTGGTTTACATCGTTACTGTTCTGTTTCGTGCAAGGTCAGAGCAGTTTCAAGTAAGACTAATGATTCAGCTCCTCCCTTCATTTTAATCCAGAGTCGTCCTGAGGGAAAACCAGAGAATACTCCTCAAACACCAAAGCCTTTGCATAGGAGAAAGGGAATACCCCGCAGAGCTCCCTTCTTCTA 800 0.4088 METTIYAIEMGSTADGDEEQHGGGGPENALQFISGYRAKLLNCSKLFPNQIATGIAEKANTERRQSDFGFIDAPKRNQVEQVNQCKISKLKWLDVLLNKTFFDLCESHPVRRNELNRYCVNCKVSACQYCVSSGAHRHHKILKIYRHVYKDVVSLGAIEKHIDCSEIQPYKCNKRLIIALNPLPHSGSTSKSETSCEICGRRLTDPGLHRYCSVSCKVRAVSSKTNDSAPPFILIQSRPEGKPENTPQTPKPLHRRKGIPRRAPFF 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01582 266 ProSiteProfiles Zinc finger B-box type profile. 104 144 IPR000315 GO:0008270
Bva12g01582 266 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 76 266 - -
Bva12g01582 266 SUPERFAMILY B-box zinc-binding domain 104 145 - -
Bva12g01582 266 CDD Bbox2 104 144 - -
Bva12g01582 266 Pfam PLATZ transcription factor 146 218 IPR006734 -
Bva12g01582 266 Gene3D Classic Zinc Finger 99 144 - -
Bva12g01582 266 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 76 266 - -
Bva12g01582 266 Pfam B-box zinc finger 104 144 IPR000315 GO:0008270
Bva12g01582 266 MobiDBLite consensus disorder prediction 225 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01582 Bva-Chr12 13564100 13568074 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Bva12g01582 PLATZ 5.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01582 - - tcc:18601328 278.1