Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01580 ATGGCTTCGTTGGCATATTCCATTGGGACTTGCTTTGGCAGACCCAATTTCCAATTTTCCAACCGTCATCAGAAAATCTCTGCCTCTGCTACTAGTGCTCACCCACCACTAGTGTTTCAAAATGACAACAACGTAACAACAATGACAACCCaattgaagagaagagaagcaaTAGGACTTGCATTCGGTTTTGGCCTTCTTAATGCTCTCTCCCAACCACAACCCACATCAGCAGCCGAAGCCGTTCCATGTGAACTAACAGTAGCTCCTTCAGGCCTCGCTTTCTGTGATAAATTTGTGGGAAATGGACCTGAGGCTGTCAAGGGACAGCTGATTAAGGCACATTACGTAGGGAGATTGGAGAATGGGAAAATTTTTGATAGCAGCTATAATCGTGGAAAGCCTCTTTCATTTCGAGTGGGTGTTGGAGAGGTGATCAAAGGGTGGGATGTAGGCATTTTAGGAGGGGATGGAGTTCCTCCTATGCTTGCAGGAGGGAAACGTACATTGAAGATTCCTCCAGAACTTGGATATGGTGCGAGAGGAGCTGGCTGTAGAGGAGGCTCGTGTATTATTCCTCCAGATTCTGTTCTCTTATTTGATGTGGAGTTCATAGGCAAGGCATG 626 0.4505 MASLAYSIGTCFGRPNFQFSNRHQKISASATSAHPPLVFQNDNNVTTMTTQLKRREAIGLAFGFGLLNALSQPQPTSAAEAVPCELTVAPSGLAFCDKFVGNGPEAVKGQLIKAHYVGRLENGKIFDSSYNRGKPLSFRVGVGEVIKGWDVGILGGDGVPPMLAGGKRTLKIPPELGYGARGAGCRGGSCIIPPDSVLLFDVEFIGKA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01580 208 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 109 208 IPR001179 GO:0003755
Bva12g01580 208 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 104 205 IPR001179 GO:0003755
Bva12g01580 208 Gene3D - 80 208 IPR046357 GO:0003755
Bva12g01580 208 SUPERFAMILY FKBP-like 86 205 - -
Bva12g01580 208 PANTHER - 40 208 IPR044609 GO:0000413|GO:0003755|GO:0061077
Bva12g01580 208 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP13, CHLOROPLASTIC 40 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01580 Bva-Chr12 13555167 13559529 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01580 85 206 Calmodulin-binding Proteins AT5G48570 40.157 1.41e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01580 K01802 - qsu:112039264 268.47