Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01568 atgaACTTATTTCAATCCGAAGTTGAGTTCATTAAAGCTCTTAAACGTTTTTCGGGCATTCTACTTGTTAACACCCATGTTGTGCCTAACATCAAGGTGTTAAGTGAAGTAGGAGTTCCTGAATGGAATATTGTTAAAATCATAGAAGAGCATCCCTGGGCATTGAAGAATAAACATGATCGGTTTAAGGAGATTATAGCCGAAGTGACGGAAATGGGGCTTGATCCACTGATGGCAGTGTTTGTTTCAGCTGTTGGAACAATAGCGTCCGTAAGCAAATTCACATGGACAAAGAAAGttaatctttataaaaagTGGGGTTGGTCTGATGATGAGCTTTTAGCAGCATTTGGGAAGTATCCAAAATGCATTACAGTTTCAGAGGATAAGATTGAGAAGATAATGGACTTTATAGTCAATGAGATGGGCTATGAATCTTCCAAAATTGCTAGAAATCCTGTGTTGCTGGGCATGAGCTTCAACAAGAGGATACTTCCAAGGGGCTCCGTCTTTCGAGTTTTGTTGTCGAAAGGTCTGGTGAAAAAGATCTCCTTGTCGCGACTATTTTTCCCAAGTGAAAAGGTCTTCTTAGAGAAATTTATCACGCATCATGAGAATGAAGCCAATGAATTATTCAAGTTATATCAGGCAAAGATGTATGTTGAAGAATG 671 0.383 MNLFQSEVEFIKALKRFSGILLVNTHVVPNIKVLSEVGVPEWNIVKIIEEHPWALKNKHDRFKEIIAEVTEMGLDPLMAVFVSAVGTIASVSKFTWTKKVNLYKKWGWSDDELLAAFGKYPKCITVSEDKIEKIMDFIVNEMGYESSKIARNPVLLGMSFNKRILPRGSVFRVLLSKGLVKKISLSRLFFPSEKVFLEKFITHHENEANELFKLYQAKMYVEE 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01568 223 PANTHER CGI-12 PROTEIN-RELATED 2 220 IPR003690 GO:0003690|GO:0006355
Bva12g01568 223 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 2 220 - -
Bva12g01568 223 Pfam mTERF 24 196 IPR003690 GO:0003690|GO:0006355
Bva12g01568 223 SMART mt_12 114 145 IPR003690 GO:0003690|GO:0006355
Bva12g01568 223 SMART mt_12 146 180 IPR003690 GO:0003690|GO:0006355
Bva12g01568 223 SMART mt_12 11 40 IPR003690 GO:0003690|GO:0006355
Bva12g01568 223 SMART mt_12 45 75 IPR003690 GO:0003690|GO:0006355
Bva12g01568 223 Gene3D Transcription termination factor 3, mitochondrial 2 214 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01568 Bva-Chr12 13444833 13447184 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva12g01568 mTERF 1.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01568 K15032 - twl:120012679 222.246