Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01567 ATGTTGGGAATCATGCTTTGCTTTCTATACAGAACTAGCCTCTCTCAAACTCACAGGCAAATCACCACCATTTCTCGAATTCCACTTCACCTGGTTTTCGTTTCtgtacaaaatcaaaattcatggCTATCTGTGAAATACATGTCCACCACTTCAAATGTGAGTTCTTTTGCAGCCTCATATCTCATTAACACATGTGGGTTCTCACCTGAAAAAGCTGCTTTAGCTTCTAAGTATCTTAAGTTTAAAACTAGAGAAAAGCCAGATTTCAGGATTGAGTTCTTCAAGAAACATGGTTTCTCCGAAACCCAGGTATTAAGCATGATAAGAGAAGTTCCACAGTTGCTTCGACTTAATCCTGAGAAAAACCTCTTACCCAAAATTCAGTTTTTTAAGTCCAGAGGCATTTTGTGTTCTGACATACCTAAAATCATAGGATCATGTCCTAATGTTCTGAGAAGAAGCTTAGAGAAACAAATCATCCCATCTTTTGATTTCTGGCTGAGATTGTTTCGTTCTGAGGAGAAGTTCATTAAAGTTATTAAACGTTATTCCGGCATTCTTTTTGATCTTGATACCTACGTTGTACCTAACATCAAAGTGTTAAGAGAAGTAGGAGTTCCTGAATCGAATATTGTTAAACTCTTAGAATGGCATCCTCAGGTGTTTGCAAGGAAACATGATCGGTTTAAGGAAATGGTAGCCCAAGTGAAGGAAATGGGGCTTGATCCCATGATGGCAGTATTTGTTTTTGCTATTGGAACAATGGCATCCCTAAGCAAATCCTCGTGGATAAAGAAAGCTGATCTTTATAAAAAGTGGGGTTGGTCTGATGAGGAGCTATTAGCAGCATTTGGGAGGTATCCACAATGTATGACAGTTTCAGAGGATAAGATTGAGAAGACAATGGAGTTTTTAATCAATGAGATGGGCTGTGAATCTTCCACTATTGCCAGAAATCCTTCATTGCTGGGCATGAGCTTTAACAGGCGGATAGTTCCAAGAGCTTCTGTCTTTCAAGTTTTGTTGTCAAAAGGTCTGGTGAAAAAGCTGTCTTTGTGGCAACTATTTTTCCCAAGTGAAAATGCCttcttaaagaaatttatcatGCATCATGAGAATGAAGCCAATGAATTATTCAGGCTATATCAGGCAAAAATGGATGTTAAAGGATG 1175 0.3753 MLGIMLCFLYRTSLSQTHRQITTISRIPLHLVFVSVQNQNSWLSVKYMSTTSNVSSFAASYLINTCGFSPEKAALASKYLKFKTREKPDFRIEFFKKHGFSETQVLSMIREVPQLLRLNPEKNLLPKIQFFKSRGILCSDIPKIIGSCPNVLRRSLEKQIIPSFDFWLRLFRSEEKFIKVIKRYSGILFDLDTYVVPNIKVLREVGVPESNIVKLLEWHPQVFARKHDRFKEMVAQVKEMGLDPMMAVFVFAIGTMASLSKSSWIKKADLYKKWGWSDEELLAAFGRYPQCMTVSEDKIEKTMEFLINEMGCESSTIARNPSLLGMSFNRRIVPRASVFQVLLSKGLVKKLSLWQLFFPSENAFLKKFIMHHENEANELFRLYQAKMDVKG 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01567 391 Pfam mTERF 92 243 IPR003690 GO:0003690|GO:0006355
Bva12g01567 391 Pfam mTERF 257 364 IPR003690 GO:0003690|GO:0006355
Bva12g01567 391 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 42 388 - -
Bva12g01567 391 Gene3D Transcription termination factor 3, mitochondrial 173 382 IPR038538 -
Bva12g01567 391 PANTHER CGI-12 PROTEIN-RELATED 42 388 IPR003690 GO:0003690|GO:0006355
Bva12g01567 391 SMART mt_12 142 173 IPR003690 GO:0003690|GO:0006355
Bva12g01567 391 SMART mt_12 282 313 IPR003690 GO:0003690|GO:0006355
Bva12g01567 391 SMART mt_12 178 208 IPR003690 GO:0003690|GO:0006355
Bva12g01567 391 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Bva12g01567 391 SMART mt_12 314 348 IPR003690 GO:0003690|GO:0006355
Bva12g01567 391 SMART mt_12 213 243 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01567 Bva-Chr12 13441309 13442820 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva12g01567 mTERF 6.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01567 K15032 - qsu:112020620 351.673