Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01565 ATGACAAGGAAACATGAAGGGTTCAAGGAGATTGTAGCAGAAGTGAGGGAAATGGGGTTTAATGTTATGATGGGGCAATTTGTGATGGCTGTTGCtatattaactaaaataagcAAATCCACGTGGGCAAGGAAGGTTGATCTTTATAAAAGGTGGGGTTGGTCGGATGATGAGACTTTAGCAGCTTTTGGGAGGTTTCCAATGTATATGTGTTATTCAGAGGATAAGATTGAGAAGACAATGGACTTTTTCGTCAATCAGATGGGCATTGAATCTTCTACTATTGCCAGATATCCAGCATTGCTGAGCTATAGCTTTCACAAGCGAATAGTTCCAAGGGCTTCTGTCATCCAAGTTTTGTTGTCAAAAGGTTTGGTGAAAGAGTTACCCTTCCCAACGATGTTTTACTCGAGTGAAGAAGTCTTCCTGGACAAATTTATCACTTGTCAAGGGAATGAAGCCGATGAACTATTGAAGCTATATCAGGCAAAAAAAGGATGCTG 503 0.3976 MTRKHEGFKEIVAEVREMGFNVMMGQFVMAVAILTKISKSTWARKVDLYKRWGWSDDETLAAFGRFPMYMCYSEDKIEKTMDFFVNQMGIESSTIARYPALLSYSFHKRIVPRASVIQVLLSKGLVKELPFPTMFYSSEEVFLDKFITCQGNEADELLKLYQAKKGC 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01565 167 Gene3D Transcription termination factor 3, mitochondrial 1 160 IPR038538 -
Bva12g01565 167 PANTHER CGI-12 PROTEIN-RELATED 6 165 IPR003690 GO:0003690|GO:0006355
Bva12g01565 167 SMART mt_12 25 55 IPR003690 GO:0003690|GO:0006355
Bva12g01565 167 SMART mt_12 92 126 IPR003690 GO:0003690|GO:0006355
Bva12g01565 167 SMART mt_12 60 91 IPR003690 GO:0003690|GO:0006355
Bva12g01565 167 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 6 165 - -
Bva12g01565 167 Pfam mTERF 31 143 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01565 Bva-Chr12 13432881 13434361 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva12g01565 mTERF 1.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01565 K15032 - vvi:100256384 174.096