Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01563 ATGGGGTTTAATGCTTTGACGGGGAAACTCGTGATGGCTGTTGCTATAATAACTTGCATAAGCAAATCCACATGGGCAAGCAAGGCTGATCTCTGTAAAATGTGGGGTTGGTCTGATGAGGACATTTTAGCAGCATTTCAGAGGTTTCCACAGTATATGTCACATTCAGAGAATAAGATTGAGAAGACAATGGGTTTTTTTGTCAATCAGATGGGCTGTGAATCTACCATTATTGCCAGATTCCCAGTATTGCTCAGCTTGTGCTTAAAGAAGCGAATAGTTCCAAGGGCTTCTGTCATCAAAGTTTTGTCTTCGAAAGGTCTTCTGAAACAGCTCAACATCCAACAAATATGTTACTCAAGTGAATA 368 0.4049 MGFNALTGKLVMAVAIITCISKSTWASKADLCKMWGWSDEDILAAFQRFPQYMSHSENKIEKTMGFFVNQMGCESTIIARFPVLLSLCLKKRIVPRASVIKVLSSKGLLKQLNIQQICYSSE 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01563 122 Pfam mTERF 10 116 IPR003690 GO:0003690|GO:0006355
Bva12g01563 122 Gene3D Transcription termination factor 3, mitochondrial 1 122 IPR038538 -
Bva12g01563 122 PANTHER CGI-12 PROTEIN-RELATED 1 122 IPR003690 GO:0003690|GO:0006355
Bva12g01563 122 SMART mt_12 43 74 IPR003690 GO:0003690|GO:0006355
Bva12g01563 122 SMART mt_12 75 109 IPR003690 GO:0003690|GO:0006355
Bva12g01563 122 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01563 Bva-Chr12 13424412 13426383 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva12g01563 mTERF 8.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01563 K15032 - twl:120012679 127.487