Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01561 ATGGCACCAgAGTATGGTTCTGAGGGAATTATTTCTATAAAGGGAGATGTTTACAGTTATggaattttaatgttagaagTGTTGACAAGAAAGAAGCCCACAGATGATATGTTTACAGCTGGATTGAATCTGAAAGGCTGGGTGACAAATTTGATGCCGCATGTTATACAAATTATAGACTCCAATTTACTCCAACAAGAGAGGCAGCAATTTGATGACATAATAACATATGCACCAACCATTTTTGAGTTGGCTCTCAATTGTTGTGCAAATTTGCCAGAAGCACGAATTAGTATGACAGATGCAGTTGCATCAGTGAACAAAATCAAGATGCTGTTTCTGCAAAAGGCAAGGCCATA 359 0.3621 MAPEYGSEGIISIKGDVYSYGILMLEVLTRKKPTDDMFTAGLNLKGWVTNLMPHVIQIIDSNLLQQERQQFDDIITYAPTIFELALNCCANLPEARISMTDAVASVNKIKMLFLQKARP 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01561 119 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 116 - -
Bva12g01561 119 Gene3D Transferase(Phosphotransferase) domain 1 1 116 - -
Bva12g01561 119 ProSiteProfiles Protein kinase domain profile. 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva12g01561 119 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
Bva12g01561 119 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 1 116 - -
Bva12g01561 119 SUPERFAMILY Protein kinase-like (PK-like) 1 109 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01561 Bva-Chr12 13415736 13416632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01561 2 118 Receptor kinase-like Gene Family AT3G47570 33.051 7.95e-19 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva12g01561 PK_Tyr_Ser-Thr 3.8e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01561 - K13420 gmx:100784397 146.362