Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01537 ATGGCGAGTTGGGATAATCGTGAAAGGCTTGACTGCTGcctttatgattattttgtcaaaagaaaCATGCATGAAACGGCTAAGATTTTCAAGAACGAGGCTAATCTTCCTTATGATCACATGACTCGTGTAGGAATAGATACACCCGAAGGATTTTTGCGCGAGTGGTGGAGAACAAACTTTGAGTTTGAGTCATTTAGAGCATGGATGCATGAGAATTATACTTTCAACAAAGCTCCCTCTACCAAGGGGAAACGGATCTTTGAAACCAGACAAGAATCAAATGCTTCACAACCAGAATTGTATCGCATCAATGTACAAAGAAACTGGCGGGCCCCAGATACTCTCGCTCGCACAACGGGCAGGGGGAGGAAATCAATAGAGTCAGTGGCCCTAAATGGAATTGACAACGTGTCCCAAGGTTTTATACCTTCTTCATCTCAAGAAAACTTGACAAGCACTCCAGCAAATGCTGACAAAACAAAGGGTCAAAAAGTAGAATCTTCAGCTCTTGCTACCTCTCGAGCAGCTATTACCTCATGCAATGAGGAACCAGATCCAGTGATTGAGAATTTATTGAAGTCATTCTGGGTGTTCGAACAAGACCAGGCAGAGCTGCATGAAATATCAATGCTCGGAGAGCGCTGTAGAAACATGAAGAATTTGaggaaatttgaagaagaaaacactGGAATGCGAAAACGTGCTTGTTTCAGTTCACAATCAAAGCAGAATGACGATAGTGAAAGCATAAAAAGTGATGCTTCAAGCAATATGTA 779 0.4018 MASWDNRERLDCCLYDYFVKRNMHETAKIFKNEANLPYDHMTRVGIDTPEGFLREWWRTNFEFESFRAWMHENYTFNKAPSTKGKRIFETRQESNASQPELYRINVQRNWRAPDTLARTTGRGRKSIESVALNGIDNVSQGFIPSSSQENLTSTPANADKTKGQKVESSALATSRAAITSCNEEPDPVIENLLKSFWVFEQDQAELHEISMLGERCRNMKNLRKFEEENTGMRKRACFSSQSKQNDDSESIKSDASSNM 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01537 259 Pfam LisH 15 34 IPR006594 GO:0005515
Bva12g01537 259 MobiDBLite consensus disorder prediction 233 259 - -
Bva12g01537 259 MobiDBLite consensus disorder prediction 143 165 - -
Bva12g01537 259 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 4 246 IPR044716 GO:0003714
Bva12g01537 259 MobiDBLite consensus disorder prediction 234 259 - -
Bva12g01537 259 ProSiteProfiles LIS1 homology (LisH) motif profile. 6 38 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01537 Bva-Chr12 13112445 13117689 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Bva12g01537 LisH 4.6e-05 CL0561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01537 - - ccaj:109805542 134.806